Olea europaea var. sylvestris (wild olive): 111390107
Help
Entry
111390107 CDS
T05244
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111390107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111390107
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111390107
Complex B
111390107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111390107
NCBI-ProteinID:
XP_022870863
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MASNLPSSVAQSLWLPAAGYMAPQNFGPPFPMQFRPLAPMPHGQPFIPPSATQQFHPVGQ
TQHVGLPPGQIQPPQFSQPMLLFLPQSSQPGQTTPTSYAQPSMPISSVTPQSQPTGPSPG
VSYSSPYSFAPSFGQPQNSMNMTSQFQPAFQVSAPFGPTGGQPLLHSSQGASLVAPLQQT
SQQPLVAGLTAATVSADNGLNTTQQTASDWQEYQAADGRRYFYNKVTKQSSWEKPLELMT
PLERADASTVWKEFTTPEGRKYYYNKETKLSKWTIPDELKLAREEAEKEAAQGADTNSTE
PAFSTGTSAERLSAAVTTVSSTNTTMFPVSSSPVPAASITDTIASPVMVSGSSATPTIHT
ASTSAAGVPLAGETVVPSPSNSTPVSNMESSSSNVETSRGGASFLDIEEAKKGMAVAGKI
NVTPVEERQLDDEPTVFANKQEAKNAFKALLESANVEADWSWEQAMRIIINDKRYAALKT
LGERKQAFDEYLMQRKKLEAEERRLRQRKVKEEFTNMLEECEELTPSTRWSKAAAKFEGD
ERFKAVEREADREDLFRNYLVDLQKKEKAKAQEEHRRNRLEFRKFLETCAFIKVDSQWRK
VQGLLEDDERCRRLDKIDRLDIFQEYISDLEKEDDEQKKRQKEQLKRAERKNRDEFRKMM
EDHMASGTLTAKTHWLDYCKMVRDSEAYQAVASHTSGSTPKDLFEDFVEELEKKYEDDKA
STKDMLKLEKITVASTWTIEDFKSFIEPSSGSFTISDINLQLIYEDLIERAKEKEEKEAK
KRKRLAKDFTDKLSTIKEVNALSSWEECKQLVEDSSVYRSIGEENICREIFDDYISRLQE
KAKGKERKRQEEKAKKEKERDKEKRKDRERIEKEREKEKEKDEKEKDEDREREKERDKVK
EHLKNDEVESENIDITDGHGHRDNKRKEKDKERKHRKWRQIDDVSSDEDDKEKSKKSRRH
GSDRKKSRKHAYLPESDSASRCKRHKREHRDGSTRICDHEELEDGELGEDGGDPVNSTGG
FWLL
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaacctcccatcttctgttgcacagtcactttggctgcctgcggctggatac
atggcccctcaaaattttggtcctccctttcctatgcaatttcgtccgctagcaccaatg
ccacatggacagccatttattcctccctctgccactcagcaatttcatccagttggacaa
acacaacatgttgggttgcctcctggtcaaattcaacctccacagttttctcaaccaatg
ctgctatttctgccacagtctagccagccagggcaaactacaccaacttcatatgcccaa
ccaagtatgcctatctcatcagtcacgccgcagtctcagcctactggcccaagtcctgga
gtttcatattcttccccatactctttcgctccatcttttggccagccacagaatagcatg
aacatgacatcccaattccaacctgcatttcaagtgtctgctccctttggccctactgga
ggacaacctttgttgcactctagtcagggtgcttcacttgtggcaccattacagcaaact
agtcaacaacctttggttgcaggccttacagctgctactgtgtcggctgataatggtctt
aataccactcaacagactgcttctgattggcaagaatatcaagctgctgatgggagaaga
tatttttacaacaaagttacgaagcagtctagctgggagaagcctcttgaattgatgaca
cccttagagagagctgatgcctcaactgtttggaaagagttcacaactcctgagggtaga
aagtattactacaacaaggaaacaaagctatctaaatggacaatacctgatgaattgaag
ttggcccgtgaagaggctgaaaaggaagctgcccagggagcagatactaactctactgaa
ccagcattttctacaggcacctctgctgaacgactatctgctgctgtcaccacagtcagt
tccaccaacacaacaatgtttcctgtctcttcaagccctgttccagcggcctccattact
gatactattgcttctccagtgatggtttctggatcatcagccacccccacgatacacact
gcttccacaagtgcggctggtgtgcccttagctggagaaacagttgtgccatcaccttct
aattcaacaccagtgagcaacatggaaagttcatcctccaatgttgagacttcacggggt
ggggcttcttttctggatattgaggaggcaaagaagggaatggctgttgctggaaaaata
aatgtaactccagtggaagagagacaattggatgatgaacccacggtatttgctaacaag
caggaggcaaaaaatgcattcaaagcactattagaatctgcaaatgttgaggctgattgg
agttgggagcaggccatgcgaatcataattaatgacaaacgatatgctgcactgaaaact
cttggtgagcggaaacaagcgttcgatgagtacttgatgcaaagaaaaaaattggaggct
gaagagagacgtctcaggcagagaaaagtgaaggaggagttcacaaatatgttggaagaa
tgtgaagaacttacaccatccacccgctggagcaaagcagcggcaaagtttgaaggcgat
gagcgtttcaaggctgttgaacgagaagctgatcgtgaggatctgtttaggaactacttg
gtagatcttcagaaaaaggaaaaggcgaaggctcaagaggagcatcgccggaatagattg
gagtttaggaaatttctggaaacctgtgcctttatcaaggttgatagccagtggcggaaa
gttcaaggtctcttggaagatgatgaaagatgcagacgactcgataaaatagaccgcctc
gatatttttcaggaatatatcagtgacttggagaaggaggatgatgagcagaagaagaga
cagaaggaacaactgaaacgagctgagcgtaaaaaccgtgatgaatttcgcaagatgatg
gaagatcacatggcttctggcactcttactgctaaaactcactggcttgattattgtaaa
atggtcagggactctgaagcttaccaggctgttgcctcacacacttctggttctacgccg
aaggatttgtttgaggattttgttgaagaattggagaaaaagtatgaagatgacaaagcc
agtacaaaagatatgctgaagttggaaaagatcacagttgcatcgacatggacaattgaa
gacttcaagtcctttattgaaccaagcagtggttcatttacgatatctgacattaattta
cagctcatatatgaggaccttattgagagagcaaaggagaaagaagagaaagaagctaag
aaacgtaaacgtcttgccaaagatttcactgataaactgagcaccattaaggaagtaaat
gctttgtcgagttgggaggaatgcaaacaacttgttgaggacagctctgtgtacaggtcc
attggagaagaaaacatctgtagggagatatttgatgattatattagtcgcttgcaagag
aaagccaagggaaaggagcgtaaaaggcaggaggaaaaggccaaaaaggaaaaagagagg
gataaggagaagagaaaagaccgagagagaatagaaaaagagagagagaaggaaaaagag
aaggacgagaaggagaaagacgaagatcgagagcgtgagaaagaaagagacaaggtgaag
gaacacttaaaaaatgatgaagtagagagtgagaatatagatatcacagacggtcatggg
cacagagacaacaagaggaaggaaaaggacaaagagaggaaacataggaagtggcggcag
attgatgacgtgagttctgatgaggatgataaagagaagtcgaagaagtcccgtcgtcat
ggcagtgaccgtaaaaagtcaagaaagcacgcatatttgcctgaatcagatagcgcgagt
aggtgcaaaagacacaaaagagaacacagggatggtagtactcgtatttgtgatcacgag
gagcttgaagatggtgaactaggcgaggatgggggggatcctgtgaattcaactggcgga
ttttggctcctttaa
DBGET
integrated database retrieval system
