Olea europaea var. sylvestris (wild olive): 111391247
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Entry
111391247 CDS
T05244
Name
(RefSeq) formamidopyrimidine-DNA glycosylase isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111391247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111391247
Enzymes [BR:
oeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
111391247
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
111391247
DNA repair and recombination proteins [BR:
oeu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111391247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
PPP4R2
Motif
Other DBs
NCBI-GeneID:
111391247
NCBI-ProteinID:
XP_022872182
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MPELPEVEAARRAIEEHCVGKKIVKSVVANDSKVIDGVSPKDFEASLTGKTIVASHRKGK
NMWLQLDSPPFPSFQFGMTGAIYIKGIAVTKYKRSAVKDTDEWPSKYSKLFIELDDGLEF
SFTDKRRFAKVRLLDNPVSVPPISELGPDALLEPMTVDEFYNSLSKKKIGIKALLLDQSF
ISGIGNWMADEVLYQARIHPLETASSLSKESCVTLLKCINEVIEEAVEVGADSSQFPSNW
IFHSREKKPGKAFVDGKKIEFITAGGRTSAYVPELQKLSGNQARKVVVESSNNIEESSNE
EATDSRKSKVPRGRKATVKKPSSKRKSKESNGESNSDDDDDKSLRKEPPSRGKSKGRNEN
DDQKKKSKGKKTPTKRIFEESDDEDDVDNASGSGDDDEEDHKVMSKKRGKAGSLSKGKVG
SGRNGRQQKRVAK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcttccggaggtggaggcggcgcgtcgtgccatagaggagcactgcgttggg
aagaaaattgtgaaatcggtggtcgccaatgattccaaagtcatcgacggcgtctctccg
aaggacttcgaggcatcgctcaccgggaaaaccatcgtcgcttcccatcgcaagggcaag
aacatgtggcttcagctcgattccccacctttcccctccttccagtttggaatgacagga
gctatatatatcaagggaattgctgttactaaatataagcggtctgccgtgaaggatacg
gatgagtggccttccaagtattccaagttatttattgaattagatgatgggttggagttt
tcattcacggataagaggcgctttgctaaagttcgcttgcttgacaatcctgtttctgtg
cccccaatatctgagcttggtcctgatgcgttgttggaacctatgactgtagatgagttc
tacaactccttgagcaagaagaagattggaatcaaggctcttttactggaccagagtttt
atctcaggcattggcaattggatggctgatgaagtactatatcaagctaggatccatcct
ctggaaactgcttccagtttgtccaaagaaagctgtgtaacgttgctcaagtgcattaat
gaggtaattgaagaggccgttgaggttggggcagatagtagtcagttccccagtaattgg
attttccattcccgggaaaagaagcctggaaaggcttttgttgatgggaagaagattgaa
tttatcactgctggtggccgaacgtcggcctatgtaccagaattgcaaaagctgagtggt
aatcaagctaggaaagtagtggttgaatcatccaacaacattgaagaatcaagcaacgag
gaagcgactgattctaggaaatcaaaagtcccaagaggaagaaaggctacggttaagaaa
ccttcctcgaagagaaagtccaaggaaagtaatggtgaaagcaacagtgatgacgatgat
gataaaagtttaaggaaggaacccccttcaagaggcaaatccaagggaaggaacgaaaat
gatgaccagaagaagaaatctaaaggaaagaaaactcccacgaagagaattttcgaggaa
agtgacgatgaggatgatgtagataatgctagtgggagtggcgatgatgatgaagaggat
cacaaggtgatgtccaagaaacgaggaaaggctgggtcactatcgaagggtaaggttgga
tcaggtcgaaacgggaggcagcagaagagagtggcaaaatag
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