Olea europaea var. sylvestris (wild olive): 111391308
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Entry
111391308 CDS
T05244
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03030
DNA replication
oeu03410
Base excision repair
oeu03420
Nucleotide excision repair
oeu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111391308
03410 Base excision repair
111391308
03420 Nucleotide excision repair
111391308
03430 Mismatch repair
111391308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oeu03032
]
111391308
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111391308
DNA replication proteins [BR:
oeu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111391308
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111391308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_lid_RFC1
AAA_22
RCF1-5-like_lid
AAA_30
PTCB-BRCT
AAA_19
AAA_assoc_2
Rad17
AAA_5
nSTAND3
BRCT_2
RuvB_N
AAA_16
Zeta_toxin
DNAX_ATPase_lid
Gp44_lid
RsgA_GTPase
Sigma54_activ_2
AAA_18
AAA_24
AAA_14
NTPase_1
TsaE
SAA
Motif
Other DBs
NCBI-GeneID:
111391308
NCBI-ProteinID:
XP_022872269
LinkDB
All DBs
Position
Unknown
AA seq
1007 aa
AA seq
DB search
MSDIRKWFMKQHDKGTGNGNASKPAKPSGAEKPAVISQPEKSVQEPQESSGRRKTSKYFS
KDKHVKDELEVEEVSAKRKARRGRAELDSDVKPPPGKKVHKVEDEDDDEDFVTPSRRESV
DATRGKKLKSGVGKGVAQNLIDESDEDDAGKAKSNLKTAGRGPGGKNASATLTTTTDMDV
DGSDKEDVDDKDAKSTKSGGRGRGGRGTSAGGRGGGGGRGGFMNFGERKDPPHKGEKEVP
EGASDCLAGLTFVISGTLDSLEREEAEDLIKRYGGRVTGSVSKKTNYLLCDEDIGGRKSA
KAKELGTKFLTEDGLFDMIRTSNKSKTSIQESKKPLDKVAPSPPKKSPQVPETKKQVGKH
VVTSVAVKGLSPAASLPKRKDQPTAQSGLPWTEKHRPKVPTDIVGNQSVVKQLHDWLSDW
NKKFLNTDQKGKGKKQNDSGAKKAVLLSGNPGIGKTTSAKLVSQMLGFRTIEVNASDSRG
KADAKIEKGIGGSTSNSIKELVSNEALSLNMERSQRPKTVLIMDEVDGMSAGDRGGVADL
IASIKISKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQMGKRLSQIAKQEGLQVNE
IALEELAERVNGDMRMALNQLQYMSLSMSVIKFDDIKQRLQSSSKDEDISPFTAVDKLFN
FNAGKLRMDERIDLSMSDPDLVPLIIQENYINYRPSSTGKDDNGMKRMSLLARAAESIGD
GDIINVQIRRYRQWQLSQIGSLASSIVPAALLRGQREILEQGENNYNRFGGWLGKNSTLG
KNYRLLEDLHVHLLGSHESNLGRMTLRLDYLTLMLKQLTNPLRVLPKDEAVEKVVEFMDF
YSISMEDFDTIVEISKFKGHPNPLDGIQPAVKAALTRAYNKGSSSRVIRTADLIKLPGIK
KAPKKRVAAMLEPVTDPSAEENGEEFAVNEEENLSDTEELEDSADAEKQLQTDLESLTSK
GIQVQVDLKGSGSSSAKKAPAGRGKGSSQATEKKGGRGSGSASRKRK
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatataagaaaatggttcatgaagcaacatgataagggcactgggaatggaaat
gcatcaaagcctgcaaagccctctggagctgagaagcctgctgtcatttctcagcctgaa
aaatcggtacaagaaccccaagaaagttctggcagaaggaaaaccagcaaatatttttct
aaagataaacacgtgaaagatgagctggaagttgaggaggtttcagcaaaaagaaaggcc
cgaaggggtagggcggagttagacagtgatgttaaacccccacctggaaaaaaggttcac
aaagtcgaggatgaagatgatgatgaagattttgtcacgccttctaggagggaatcagtt
gatgccacccggggcaagaaattgaaaagtggggtgggtaagggagttgctcaaaacctt
attgatgaaagtgatgaagatgatgctggtaaagcaaaatctaatctcaaaaccgctggt
aggggccctggagggaaaaatgcttcagctactttaactactactacagacatggatgtt
gatggaagtgataaagaggatgtcgatgataaagatgctaaatcgaccaaatctggtgga
cgaggccgtggtggaagaggcacatcagcaggtggaagaggcggaggtggtggacggggc
ggatttatgaattttggagaaaggaaagatcctcctcacaaaggagaaaaggaagtccct
gaaggtgcttctgactgtttagctggtttgacttttgtgattagtggaacacttgacagt
ttggaaagagaagaagcggaggacttgattaaacgctatggtggtcgtgttactggatct
gtcagcaaaaagacgaattatctcctatgtgatgaagatattggtggacggaaatctgct
aaggctaaagaacttggcactaaatttcttacggaggacggtttatttgatatgattcgc
acatcaaataaatcgaaaacaagcatacaagaatcgaagaagccactggataaggttgct
ccatctcctccaaagaagagtcctcaagtgccggaaacaaagaaacaagttggtaaacat
gttgtaacaagcgtagctgtgaaaggattgtctccagctgcctccctgcccaagcgaaaa
gatcaacctacagctcagtctgggttgccatggaccgaaaaacatagaccaaaggttcca
actgatattgttgggaatcagtcagtggtgaagcagcttcatgattggctgtcagactgg
aataaaaagttcctcaatactgatcaaaaaggaaaggggaagaaacagaatgattcaggt
gctaaaaaagctgtactactcagtggtaaccctggcatagggaagactacatcagctaaa
ttggttagtcagatgcttggtttccggacaattgaggtcaatgctagtgacagtcgtgga
aaggctgatgctaaaattgaaaaaggaattggtggaagcacttctaactctataaaagag
cttgtcagtaatgaagccctgagtcttaacatggaacgctctcaacgcccaaagacagtg
cttattatggacgaggttgatggtatgtctgcaggagatagaggtggagtggctgatctt
attgccagcattaagatctccaaaattcctattatctgcatatgtaatgatcgctacagt
cagaaactaaagagtctagtgaactactgccttcttctaaacttccggaaaccaacaaag
cagcagatggggaaaaggttatcacagatagccaagcaagaaggacttcaagttaatgag
attgctcttgaggaactggcagagagagttaatggagacatgcgtatggccctgaaccaa
ctgcagtatatgagtctctctatgtctgtcatcaaatttgatgacattaaacaacgcctt
caaagcagttcaaaggatgaagatatatcaccctttacggctgttgataagctgtttaat
ttcaatgctggaaagttgagaatggatgagagaattgaccttagcatgagtgatccggat
cttgtcccactcattattcaggagaactatatcaattataggccaagttcaactgggaaa
gatgacaatggaatgaaaaggatgagcttgctcgcccgtgctgcagagtctattggagat
ggtgatattattaatgtccagattagaagatatcgacagtggcaactctctcaaattggc
tctcttgcatcttctatagttcctgcggctctattacgtgggcaacgggaaatacttgag
cagggagaaaacaattacaatagatttggtgggtggctgggaaagaactctacactgggg
aagaattacagacttcttgaggacctgcatgttcatcttcttggatctcatgaatctaat
ttgggaaggatgacattgcgacttgattatcttactcttatgttgaagcagttgaccaat
cccttaagggtgctacctaaggatgaagctgttgaaaaggttgttgagtttatggatttt
tactccattagcatggaggactttgatacaattgttgagatatcaaaatttaaggggcac
ccgaatccattggatggcatacagcctgcagtaaaagctgcattgacaagagcatacaat
aaaggcagctcatcacgtgtgattcggactgcagatctcatcaaacttcctggaataaaa
aaggcccctaaaaagcgggttgcagcaatgctcgaacccgtaactgatccttcggcggaa
gaaaatggtgaagaatttgctgtaaatgaagaagaaaacctttctgacacggaagaactg
gaagactcagctgacgcagagaagcagctgcaaacagatctagagagccttacttcaaag
ggcatccaagtacaggtggacttgaagggttcaggaagctcaagtgccaaaaaagcacct
gcaggcagagggaagggcagttctcaagcgacagaaaagaaagggggtcgtggttctgga
tcagcttcaaggaagaggaaatga
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