Olea europaea var. sylvestris (wild olive): 111392304
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Entry
111392304 CDS
T05244
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111392304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111392304
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111392304
mRNA degradation factors
5'-3' decay
Decapping complex
111392304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
DUF4364
TYW2_N
gpW
DUF445
Motif
Other DBs
NCBI-GeneID:
111392304
NCBI-ProteinID:
XP_022873385
LinkDB
All DBs
Position
Unknown
AA seq
1446 aa
AA seq
DB search
MASASNQNPPGGGPFDMFKLLKPSTPPPPNSTTTANPNPPNPNSNINTSISNPNLISSPF
SPPSASYPPPTGGVSGGGTYSYAPQNSPFQYFSHLPMYSTPNPTPPRPDFTNMNPQRSMS
YPTPTLQPQVQPPNTPHHQNFQNPPNSQITNNHGPRLMALLPSTLDVPQQQPVMPMPLIH
PTSSAGSDFSVPQNANSLPSGPSLGIPHQGAMMRMPSSKLPKGRHLIGDRLVYDIDVRLP
GEVQPQLEVTPITKYGSDPGLVVGRQIAVNKSYICYGLKLGAIRVLNINTALRSLLKGLS
QRVTDMDFFAEDVHLLASASVDGRIYVWKITEGPDEEDKPQITGKIVIAIQITGEWESVH
PRVCWHCHKQEVLVVGIGRHVLKIDTTKVGKGEVFSAEEPLKCPIDKLIHGIQLVGSHDG
DVTDLSMSQWMTTRLVSASVDGTIKIWEDRKSLPIAVLRPHDSQPVNSVTFLAAPNRPDH
IILITGGPLNRELKIWASSSEEGWLLPSEAESWRCTQTLELKSSAEMQVEEAFFNQVVAL
SHAGLLLLANAKRNAIYAVHLEYGPNPAATRMDYIAEFTVTMPILSFTGTSEVLPHGEQI
VQVYCVQTQAIQQYALDLSQCLPPPMDNMVFEKLDSSISNDSSTIEGLANLGPSGNKSTE
TPLSSSTTKPSERENGSENASSERYPISAASAESHTLQEFSTPNIEIKPVPSSLVTNIAG
VSSVASPPLPSSPRLSRELSGFRSPSSCFEPVPVVNDRDADPKVVEYSVDGQMDAVHAKS
SDGTLMDGDPINDENKISQDDISSSPEQHSKFKHPTHLVTPSEILMASSSSEVNRANEPK
SDHELNIQDVVISNDTQNMEVEVKVVGDTIFAQNNDIGSQEELHNFGSENKEKSFYSQAS
DLGIDMARECQALPADTYIVEETRQLDGTGGSESVTQPSTPDEEVHDSTKEVSKKVADSS
LPMPVQQPPVPSTKGKKHKGKSTQGSSPSSPSPSAFNSTDSSNEPGVNSSNPSVETAFAQ
VLSMQEMLNQLVATQKDMQKQMTGMVAVPVTKEGRRLEAALGRRMEKVVEANADAMWARF
QEEIAKQEKASRDHTQQLTNMINNCISMDLPSIVEKTFKKEITAVGQAVARTIIPSIEKT
VSTSITEAFQKGVNDKAVNQLEKSVSSKLEATVARQIQTQFQTSGKQVLQEALKSSLEAS
VVPAFEMSCRAMFEQVDAAFQKGIVEHTATAQQHFESSHSPLAIALRDAISSASAMNTLS
SELLDGQRKLLALAVAGANSKVPNHPLLSQLSNGPLGGLHEKLEVPLDPTKELSRLIAER
KYEEAFTAALQRSDVSIVSWLCSQVDLPGILSINPLPLSQGVLLSLLQQLSCDISKETPQ
KLTWMREVLSAINPTDPMIVVHVRPIFEQVYQVLNHHRNLPTTNGSELPKIRLIMHVINS
MLMTSK
NT seq
4341 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccagcaatcagaacccaccaggcggaggtccgtttgatatgttcaaacta
ttgaaaccttctactccgccaccacccaattcgactactactgcaaaccctaatccgcca
aaccccaatagtaatattaatactagcattagtaaccctaatttgatttcttcccctttc
tcacccccatcagcctcttatcctccacctactggcggcgtttctggtggtgggacatac
tcatacgcacctcagaattccccctttcagtatttcagtcacctccctatgtacagtact
cctaatcctacaccaccacgcccggactttactaacatgaacccccagaggtctatgtct
tatcccacacccacgctccaaccccaagttcaacctcctaatactccacaccaccagaat
ttccaaaaccccccaaattctcaaataactaacaatcatgggccgagactgatggccttg
ttgccttccacccttgatgtcccgcagcagcaacccgtcatgccaatgcccctaatccac
ccaacctcctctgcagggtctgatttctcggtcccccagaatgcgaactcgttgccttcg
ggacctagccttgggattccacatcagggtgccatgatgcggatgccaagcagtaagctt
cccaaggggcggcatttgatcggggatcgtctggtttatgatatagatgtgaggttgccc
ggcgaggtgcagcctcaacttgaggttactcccattacaaagtatgggtctgatccaggt
ctcgttgtgggcaggcagattgcggttaacaagagttatatatgttatgggcttaagttg
ggcgctatccgtgtgctaaatattaacactgctttgagatcattgcttaagggtctatct
cagagggtcacagacatggatttctttgccgaggatgtccaccttttggctagtgcaagc
gttgatggccggatttatgtgtggaaaattaccgaaggtccagatgaagaagacaagcct
caaattactggaaagattgttattgccattcaaataactggagaatgggagtctgttcat
ccaagagtttgttggcattgtcataaacaagaagttcttgtggtgggaattggccggcat
gttttaaagattgacactacaaaagttggaaaaggagaagtgttttcggcagaagaaccc
ctcaaatgtcccattgacaagttaattcatgggattcaactagttggtagccatgatgga
gacgtgaccgacttatccatgtcccagtggatgaccactcgtttggtctctgcctcagta
gatggcacgataaagatttgggaagatcgcaagtccctaccaattgcagttctccggcca
catgacagccaacctgttaattctgtcacatttttggctgctcctaatcgcccagatcac
atcatacttattactgggggtcctttgaatcgggaactgaagatatgggcatcttcaagt
gaagaagggtggttacttcctagcgaggctgaatcgtggcgctgtactcagacattggaa
ttgaagagttcggcggagatgcaagtagaagaagcgttctttaatcaagttgtagctttg
tcacacgctggtcttcttttgctggcaaatgccaaaaggaatgctatatatgctgtgcac
ttagaatatggccctaacccagcagcaacccgaatggattacatagcagaattcactgtc
actatgccaatactgagttttactgggacgagtgaagtactacctcatggtgaacagatt
gttcaggtgtattgtgtccagactcaggctattcagcagtatgctttggacttatcacaa
tgcctgccacccccaatggataatatggtgtttgagaagttggactctagcatctcaaat
gattctagtactattgaagggcttgccaatttggggccttctggcaataaatctactgaa
acacctttgtctagttcaacaacaaaaccatctgagcgtgaaaatggttcagagaatgca
tcttcggagagataccccatcagtgctgcttctgctgagtcacacaccttacaagagttc
tctactccgaatatagaaatcaaaccagttccttcatctctagtgactaatattgctggt
gtttcttctgttgcttcacctccacttccttcgagccccaggttgtccagggaactttct
ggttttagaagtccgtcaagctgctttgagcctgttcctgtggtgaatgatcgtgatgca
gatcctaaagttgtcgaatattcagttgacggacaaatggatgctgttcatgcaaaatcg
tctgatggtactttaatggatggtgatccgatcaatgatgaaaataaaatttctcaagat
gatatttcctcgtctcctgagcagcatagtaagtttaagcaccccactcatctggtaact
ccttctgagatattgatggctagttcatcttctgaagtgaaccgtgctaatgaacccaaa
agtgatcatgaactaaacattcaggatgtggtaattagcaatgatacacaaaatatggag
gtggaagtcaaagttgtaggtgatacaatatttgctcaaaataatgatattggttcacaa
gaagaacttcacaattttgggtcagagaacaaggagaaatccttttattctcaagcctct
gatctaggaattgacatggctcgagaatgtcaagcattaccagctgatacttatatagta
gaggaaactagacagttagatgggactggtggaagtgagtctgtaacccaaccttcaact
ccagatgaagaagtccatgactctacaaaggaagtatctaagaaggttgccgattcgtca
ttacctatgccagttcagcaaccacctgtgccaagtacaaaagggaaaaaacacaaggga
aaaagtactcaaggatcaagcccatcttcaccatcacctagtgctttcaattcaacagat
tcttctaatgaaccaggcgtcaactcaagcaatccttctgtagaaactgcatttgcacaa
gttttgtccatgcaagagatgcttaatcagcttgttgctacacaaaaagacatgcagaag
cagatgacagggatggttgctgtcccagttaccaaagaaggcagaagacttgaggcagca
ctgggacgaaggatggagaaggttgttgaggccaatgctgatgctatgtgggctcggttt
caggaagagattgcaaaacaggaaaaggcatcacgggatcatacacagcaactgacaaat
atgataaataattgcataagcatggacttgccatcaattgttgagaaaactttcaagaaa
gaaataacggcagttggacaagctgtagcacgcacaattattccctctattgagaaaaca
gtatccacatcaatcacagaggccttccagaaaggagtgaatgataaagctgtgaatcaa
ttggagaaatcggtcagctctaaactagaagccacagttgctaggcaaatccaaactcaa
ttccaaacttctggcaagcaagtacttcaggaagctttgaaatctagtttggaagcttct
gtggtacctgcttttgagatgtcatgcagagcaatgtttgagcaagttgatgctgctttt
cagaaaggaatagttgaacataccgccacagctcagcaacattttgagtcttcacattca
ccactggcaattgctctaagggatgctattagttcagcatcggccatgaatactttaagc
agtgagttacttgacggtcaaagaaagttgttagcattagctgttgctggtgccaattct
aaagtaccaaatcatccattgcttagccaactcagtaatggtcccttgggcggtctccat
gagaagcttgaggtacctcttgatccaacgaaagagctttcaagattgattgctgagcgt
aaatatgaggaggctttcactgcagcccttcaaaggagtgatgtttctattgtatcgtgg
ttatgctctcaggttgatttacctggaattttatcgataaatcccctccctttgagccaa
ggtgttctcctctctcttctgcaacaattgtcttgcgatattagcaaagagacacctcag
aaactaacatggatgcgggaggttctctctgccataaatccgaccgacccaatgattgtg
gtgcacgtccgtcccatatttgagcaagtatatcaagtattgaaccaccatcgcaacctt
ccgaccactaatggctccgagcttcccaaaattcggctgatcatgcatgtcataaactcc
atgctcatgaccagtaaatga
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