Olea europaea var. sylvestris (wild olive): 111393316
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Entry
111393316 CDS
T05244
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111393316
Spliceosome [BR:
oeu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111393316
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_12
UTP6_C
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
111393316
NCBI-ProteinID:
XP_022874559
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Position
4:3446150..3456622
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AA seq
826 aa
AA seq
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MGDRETSVAQISVATDHSIKAAGDYNDTSIKAASDTDASASASETNGDLAAPSTASAAGD
LVSSAGSVNETDSAAYTSNIYAGGAAVVNYAQQEIPPVMAYDTNASVDPSHFGAYESSVN
GNTVSETGSVATSLISENRISHAGLIESAAFHQPVDDSALTAEEQRLWSIVTANSLDFNA
WTSLVEETERVSEASILKIRKVYDAFLSEFPLCYGYWKKYADHEARLSSVDKVAEVYERA
VQGVTYSVDMWLHYCVFAINTYGDPDIIRRLFERGLAYVGTDYQCFPLWDKYIEYEISQQ
DWPRVAAIYTQLLEIPNQQLDRYFEGFKELLASRPLSELQTPEEAAAAAAANSDGDGNKT
EGEDRANVADQTPKPVSASLKDAEELEKYITIREELYKKAKEFDSKIVGFETAIRRPYFH
VRPLNVAELENWHNYLDFIEGCDDFNKIVKLYERCLVACANYPEYWIRYVLFMEASGSME
LADNALARATQVFVKRQPEIHPFAARFREQHGDISGARAAFQLVHTEISPGLLEAIIRHA
NMEHRLGNLEDACSLYEQSIAIEKGKEHSQTLPLLFAQYSRFLYLVPGKVEMAREILDQA
VENIQLSKPILEALIHLESLQSLPKRIDYLDSLVDKFIVPNTDSPNVPTIAEREELSSIF
LEFLDLFGDAQSIQKADYRHAKLFLRHRSTSESKKRHSEDYLISDKTKLAKSVTPSTPSI
VGAFPNTQNPWPAGYGVQPQATQAQVPQWNPGYAQQAAYSAYGSYGTNQQVPTSVPQSAA
YGTYPPTYSTQAFPQQSYAQPAGAASLTPAPPPSAVPPASYYGSFY
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgggagatagagagacttcagtggcacaaatatctgttgctactgatcatagtataaag
gctgctggagattataatgatactagcataaaggctgcttctgacactgatgcttctgct
tctgcttctgaaaccaatggagatttggcagctccttccacggcgtctgcagcaggagac
ttagtttcttcagccggttctgtcaatgaaactgattcagcagcttatacttctaatata
tatgctggtggtgcagcagttgtgaactatgcccagcaagaaattccccccgtcatggca
tatgatactaatgcatccgtggatccatctcactttggtgcttatgagtcctctgtaaat
ggcaatactgtcagtgaaacaggaagtgtcgcaacatctttaatctctgaaaatcggatt
tctcatgctgggcttattgaatctgctgctttccatcaaccagttgatgattctgcacta
actgcagaagaacaaagattgtggagcatagtgacggctaattcgttggattttaatgca
tggacttccctggttgaagaaacagagagagtatctgaggcaagcattttgaagattcga
aaagtttatgatgcatttttatctgaatttccactatgttatggttattggaagaaatat
gctgatcatgaggcacgcctcagctcagtcgacaaagttgcagaggtttatgaaagagct
gttcaaggagttacttactcagttgacatgtggttgcactattgtgtatttgccattaac
acctatggggatcctgacattatcagaaggctatttgaaagaggattagcttatgttgga
actgattatcagtgctttcctctttgggataaatacattgagtatgaaatttctcagcaa
gactggccccgtgttgctgccatttacacacagttattggagatcccgaaccagcagctg
gatcgctattttgaaggatttaaggagctactagccagtcggcctttatcagagttgcaa
actcctgaggaagctgccgcagcagctgctgcaaattcagacggagatggtaataaaact
gaaggagaagatcgtgcaaatgttgcggatcagactcctaagcctgtaagtgcaagctta
aaagatgcggaggagttggagaagtatattaccattagagaagaattatataagaaagct
aaagagttcgattctaagatcgttggctttgaaacagctatcagaaggccttattttcat
gtgcgccccctcaatgttgcagagcttgaaaattggcataactatctcgattttatcgaa
ggttgtgacgacttcaataagattgtcaagctctatgagagatgcctagtggcttgtgcc
aattatcctgaatactggatacggtatgtactgttcatggaagctagtggaagtatggag
cttgctgacaatgcgcttgctcgtgctactcaagttttcgtcaagagacaacctgaaatc
catccttttgccgctcgattcagagaacagcacggtgacatttctggggctcgagctgct
tttcaacttgttcacactgaaatttcgcccgggcttttggaagccatcatcagacatgct
aacatggaacatcgacttgggaatctggaagatgcatgctctttatatgaacagtccatt
gcaattgagaaagggaaggaacattcacagactttacctttgttgtttgcccagtattca
cgcttcctttacttggttcctggcaaggtggaaatggctagggaaattcttgatcaagca
gttgagaatatccagttgtcgaaaccaattttggaggcattgattcacttagagtcacta
cagtcacttccaaagcgaattgattatttggattcgttggttgataagttcattgttcca
aatactgacagccctaacgttccaactattgctgaaagagaagagctatcaagcattttc
ttggagtttttggatctctttggagatgcacagtctatacagaaggctgattatcgacac
gctaaacttttcttgcggcacaggagcacgtcagagtcaaagaagcgccattcagaagat
tacttgatttcagacaaaactaagcttgcaaagtcagttactccatccaccccttccatt
gtgggtgcatttccaaacacgcaaaatccgtggccagcaggttatggtgtacagcctcaa
gctactcaagctcaagtaccacagtggaaccctggttatgcccaacaggctgcatatagc
gcatacggtagttatggaacaaatcaacaagtacctacatcagtgccccaaagtgctgct
tatggaacttatcctccaacttattcaacccaggcgtttccccaacaaagttatgcacaa
cccgcgggagctgcaagcttgactccagcaccaccaccttctgcagttccacctgcttca
tattacggcagtttctattga
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