Olea europaea var. sylvestris (wild olive): 111393425
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Entry
111393425 CDS
T05244
Name
(RefSeq) nuclear pore complex protein NUP54-like isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111393425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111393425
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111393425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
111393425
NCBI-ProteinID:
XP_022874729
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Position
1:complement(9981879..9986410)
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AA seq
400 aa
AA seq
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MFGAQPSSGAAFGTPSSTPAFGTPSSTPAFGTPSSTPGFGTPSSTPTFGTPSSTPAFGTP
STPSFGSGFGTSLFSTPFSQQAQPQQQQQTPSLFQTPQPQPSSHFGFSTPFGAAAQAQPT
PFNAPSSLPFANSQLTTQMAPVAPLPFSLADRDIQAIVEAYKEEHGNPKYAFKHLLFSVT
EPQHRAKPAGVSDIMWAEAMGKLEGMESSNRERLWPQLVQCFKDLSSRLKLQDEVILSDS
ERLKMTRSNVKMLQRHFQVDTLPRIQRMQQKEQVLQRRLLRVMRIVEALEGKGFRLPLMK
GEAELAEKLAAITRQLKGPGAELSRRVQNLLAISRVQAHGLDGGSLYLPGSTNIDEQSLA
DMQEVLQQQTEAISRLCNVMKRDFRDLEIIMAEDAQMVKE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcagccttcctccggcgcagccttcggaactccctcctccacaccggca
ttcggaacgccctcttccacaccggcattcggaacgccttcctctacacctgggttcgga
accccttcctccaccccaaccttcggcaccccgtcatccactccagcattcggcacgcct
tctactccatcattcggctcggggttcggcacttcactcttttccactccattctcccag
caagcccaaccacaacagcagcagcagactccttcactatttcaaaccccacagccacag
cccagtagccattttggcttttcgacgccatttggtgccgccgcacaagctcagcccacg
ccgttcaatgctccgtcttcattgccttttgcgaattcacagttgactactcagatggct
cctgttgctccccttcccttttccctcgccgatcgtgatattcaagcaattgtagaagct
tataaggaggagcatgggaacccgaaatatgcatttaagcatcttttattcagtgttact
gaacctcagcacagagcaaagcctgctggtgtatcagacattatgtgggcagaggcaatg
gggaagcttgaaggcatggaaagttccaaccgggaacgcttgtggccacaacttgtgcag
tgttttaaagatctttcaagtcgtctcaagcttcaagatgaagtcatactctcagattct
gagagattaaagatgacacgtagcaatgtgaagatgctccaaaggcattttcaagttgac
actcttcctcggattcaaagaatgcaacaaaaagagcaagttcttcaaaggcgtctttta
agggtaatgagaatagtagaggcactggagggtaaaggtttccggttacctctgatgaaa
ggagaagctgaattggctgagaagttggctgcaattactcggcagttaaaaggacctgga
gcagaactttctcgaagggttcaaaatttgcttgctatttctcgtgttcaagcacatggc
cttgatggtggctctctttatcttccaggatcaaccaatatcgatgaacaaagtcttgct
gacatgcaagaggtcttgcaacagcaaactgaggctatatctaggctttgcaatgttatg
aagagagatttccgagatttggagatcataatggctgaggatgctcagatggttaaagag
tag
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