Olea europaea var. sylvestris (wild olive): 111394340
Help
Entry
111394340 CDS
T05244
Name
(RefSeq) coatomer subunit alpha-2-like
KO
K05236
coatomer subunit alpha
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oeu04131
]
111394340
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oeu04147
]
111394340
Membrane trafficking [BR:
oeu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
111394340
Exosome [BR:
oeu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111394340
Exosomal proteins of bladder cancer cells
111394340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_Gbeta
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_WDR41
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111394340
NCBI-ProteinID:
XP_022875870
LinkDB
All DBs
Position
5:528704..534835
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRVW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDILR
LSQMNSDFFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWE
VDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILSAHP
EMSLLAAGHDSGMIVFKLERERPAFSVSADSLFYVKDRFLRVYEYSTQKDTQLIPIRRPG
SNGLNQGPRTLSYSPTENAVLVCSDMDGGSYELYIIPKDSYSRVDTVQEAKRGIGGSAVF
VARNRFAVLEKSSNQVLVKNLKNEIVKKSVLPIATDAIFYAGTGNLLCRAEDRVVIFDLQ
QRILLGDLLTSFIRYVVWSQDMESVALLSKHSIIIADKKLVHRCTLHETIRVKSGAWDDN
GVFIYTTLTHIKYCLPNGDSGIIKTLEVPVYITKIFGNTIFCLDRDGKNHPVIIDSTEYV
FKLSLLRKRYDQVMSMIRNSELCGQAMIAYLQQKGFPQVALYFVKDERTRFNLALESGNI
EKALESAKKIDEKDHWYRLGVEALRQGNTGIVEYAYQRTKNFERLSFHYLITGNVDKLSK
MMKIAEVKNDVMGQFHDALYLGDVHERVKILENAGHLPLAYITASAHGLHDIANRLAVEL
GDNLPSLPEGKKASLLMPPSPVLCAGDWPLLMVSKGIFEGGLDDAGRDEEEDYEEAADAD
WGEALDIGEVNNMQNGDISMVVEEEDVHEETEGGWDLEDLDLPPDIDTPKTAPNARSSAF
IAPNPGMPVSQIWAQKSSLAAEHAAAGNFDTAMRLLNRQLGIKNFSPLRSLFMDLHMGSH
TYLRAVSLAPVISVAIERGWSESASPNVRGPPALVFNFSQLEEKLSAGYKATTAGKFSEA
IRYFVAILQTIPLIVVESRREVDEVKELIIIVKEYVLGLQMELKRKELTDDVVRQQELAA
YFTHCKLQVPHRRLALLNAMIVCYKAQNLSTAAHFARELLETNPTAETQAKRARQVLQAA
ERNMRDATPLNYDFRNPFVVCGSSYTPIYRGQRDVTCPYCSTHFIPSQQGELCTVCDLAE
VGADASGLLSSPSQIR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgaagtttgagacaaagagtaatagagtgaagggattgagtttccacagtaag
cggccatggatcttggcgagtcttcacagcggtgtgatccagctttgggattaccgaatg
ggcactctaattgatcgctttgacgagcatgatggtcctgttcgaggcgtccattttcac
aaatctcagccactctttgtctccggaggagatgattataagatcaaggtttggaattac
aagctgcacaggtgtttgtttacacttcttggacatcttgattatatccgaaccgttcaa
tttcaccatgagtatccctggatcgttagtgcaagtgatgatcaaactatccgggtatgg
aattggcaatcacggacttgtatttctgtcttaacgggacacaaccattatgtgatgtgt
gcctcatttcatcccaaagaagacttggttgtttcagcatctttggatcaaactgttcga
gtttgggatattggtgcattaaggaagaaaactgtttctccagctgatgacatcctgcga
ttgagtcagatgaactctgatttttttggtggagtagatgctgttgtgaagtatgtcttg
gaaggccatgatcgtggggttaactgggcttcattccatcccactctccctttgatcgtt
tctggagctgatgatcgccaagttaaaatttggcgcatgaacgatacaaaggcttgggag
gtagacacgttgagagggcacatgaataatgtatcatgtgtactgttccatgcaagacag
gacatcatcgtttcaaattcagaagataagagcattcgggtatgggatgctaccaaaagg
actggtctgcaaactttccgcagagaacatgacaggttctggatcctttcagctcatcct
gagatgagccttttggctgctggtcacgacagtggtatgattgtcttcaagttagagaga
gagcgtcctgctttttctgtgagtgctgattctctcttttacgtgaaagatcgatttctg
cgtgtttacgagtattcgactcagaaagacacacaattgataccgattcgtcgaccgggt
tctaacggtttgaatcaaggaccacgaactctttcttatagtcctactgagaatgctgtt
ttagtctgctcggatatggatggggggtcatatgagctctacattatacctaaagatagc
tatagcagagttgatacagtccaagaggcaaaaagaggtattgggggatcagcggtgttt
gtggcccgaaatagatttgcagtgctggagaaaagcagtaaccaagtgttagtcaagaac
ttgaaaaatgaaatcgtcaagaagagtgttttgccaattgctactgatgcaatattctac
gctgggactggaaatttgttgtgcagggcggaggacagggttgttatctttgacctccaa
caaaggatccttcttggagatctcctgacttcttttattaggtatgttgtttggtctcag
gacatggagagtgttgctttattgagcaaacattctatcatcattgctgataagaagctt
gtgcaccgctgcactcttcacgagaccattcgtgtcaagagtggagcatgggatgataat
ggtgtcttcatctataccacgctgactcacatcaagtactgcctccctaatggggacagt
ggaattatcaaaaccttggaagtcccagtgtacattacaaaaatatttggaaatactatc
ttttgcttggatagagatgggaaaaaccatcctgtcattattgattcgaccgaatatgtt
ttcaagctatctctgttgaggaagagatacgaccaggttatgagcatgattagaaattcg
gaactctgtggacaggccatgattgcatatctgcagcaaaagggctttccacaagttgct
ctttattttgtgaaggatgaaaggactcgcttcaacttagcacttgaaagcgggaacatc
gagaaagctcttgaatcggctaagaagattgatgagaaagatcactggtatcggctaggt
gtggaggcccttcgtcagggaaatactgggattgttgaatatgcataccagagaacgaag
aactttgagaggctatccttccattatctaattactggtaacgtggacaaattgtccaaa
atgatgaaaattgctgaggtcaagaatgatgttatgggccagttccatgatgcattgtac
cttggtgatgtgcacgagcgtgtcaagattctggagaatgcaggacatctgccccttgca
tatataactgcctcagcccatgggctccatgatattgctaatcgattagctgtggagctg
ggggataatcttccatctttgcctgaggggaagaaagcttctctgttgatgcctccaagt
cctgttttatgtgctggagattggcctttattaatggtcagtaaaggaatatttgagggt
ggtcttgatgatgcaggcagagatgaagaggaggattatgaagaggctgcagatgctgat
tggggtgaggctttggatattggtgaagtgaataacatgcaaaatggagacattagtatg
gtggtggaggaagaggacgtgcatgaagaaactgagggaggatgggatcttgaggatctg
gatcttcctccggatattgacacgccaaagacagctccaaatgcacgctcttctgcattt
attgctccaaaccctggcatgcctgtaagccagatttgggcccaaaaatcatctcttgca
gctgaacacgcagctgctggaaactttgacacagcaatgcgtttattgaatcgtcaatta
gggataaagaacttctctccattgagatcactgttcatggatcttcacatgggcagtcac
acttatttacgtgcagtgtccctggccccagtgatttctgtagcaatcgagaggggttgg
agtgagtcagcaagtccaaatgtgcggggtccacctgcacttgtgttcaatttctctcag
ttggaagaaaagctttcggctggttacaaggctacaactgctggaaaattttctgaagcc
attcggtattttgtggctattcttcaaacaattccacttattgttgttgagtcacgaaga
gaggtggatgaagttaaagagttgattatcattgtgaaggagtatgttctgggtttgcag
atggagcttaagaggaaggaattgactgatgatgtagttcgtcagcaggaattggcagct
tattttacccactgcaagctccaagttcctcaccggagacttgcactgttgaatgccatg
attgtttgctataaagcacaaaacctgagtactgcagcccattttgccagggagcttctg
gagacaaatccaactgctgaaacccaagccaaaagagcccgtcaagtactgcaggctgct
gagaggaatatgagagatgctacaccgctgaattatgacttcagaaatccttttgtggtg
tgtgggtcctcgtacaccccaatataccgggggcagagagacgtgacttgcccttactgc
agtacacattttatcccatcgcagcagggagagctttgtaccgtttgtgaccttgcagaa
gttggagctgatgcatctggtttactctcttcgccatcacagatcagatga
DBGET
integrated database retrieval system
