Olea europaea var. sylvestris (wild olive): 111394543
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Entry
111394543 CDS
T05244
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111394543
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111394543
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_DCAF12
TPR_14
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
111394543
NCBI-ProteinID:
XP_022876165
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Position
5:8173541..8196839
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AA seq
761 aa
AA seq
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METLCFHDGNITDLINRRALNVHNDSNSVLQMHSSLVRRLSLERELEGHHGCVNSMAWNS
TGSLLISGSDDTQLNVWSYTSRKLLHSIETGHSTNIFCTKFIPETSDELVVSGAGDAEVR
LFNLSRLYGRGLEENVISPFALFQCHTNRVKKLAVEVGNPNVVWSASEDGTLRQHDLREG
VSCPPAGSSHQECRNILLDLRCGAKKSLADPPKQSLALKSCDISPTRPHLLLVGGSDAFA
RLYDRRMLPPLSSSQKMLPPPPCVNYFCPMHLSDCGHSSLHLTHVTFSTNGEEVLISYSG
EHVYLMDVNPAALGSEMRYTSGDVSKVMSFNPMISGVGLLSSVSGVFSNGFPVRNRVAAK
LDKCRKLVQIAEKSLKEGTNFYYGVEACNEVLDGHGHEIGPTLVHECLCIRATLLLKRKW
KNDAYMAIRDCHRARKINPSSFRALICMSEALSQVGKHEAALEFADAARSLAPSDFEVGE
KVDNIKRHIDAAEVEKAKKENNRGSKSVHRAGSVLSMSDIIYRPEGNGDASQDGPEREDS
DLDEELEFDFETSVSDEGHDFDSNVLHGSLNFRIHMRGDSATETGRPNGASGLPTPSCQS
NKVPYQPESVTDMKQIYVGHCNIGTDIKQASFLGQKGEYIASGSDDGRWFIWEKRTGRLL
KMLHGDEAVVNCIQCHPLDCVVATSGIDSTIKIWTPSASVPSIVSGGAAGPEAPNVLDAM
ESNQRTLCRTRETFLPFEILERFRMHEFTEGSLHPFECTQS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctttgttttcacgacggcaacatcactgacttgattaatcgtcgcgctctc
aacgttcacaatgattcaaatagtgttttgcaaatgcactcttcacttgtgcgaaggctc
tccttggaaagagaacttgaggggcatcatggttgcgtaaattcaatggcttggaactca
acaggctctctcttgatatcgggatctgatgatacacagcttaatgtttggtcatataca
agccgcaaacttttgcactccattgagacaggtcattctactaacatattttgtacaaaa
ttcattcctgaaacttcagatgaattagttgtctctggagcaggagatgctgaggtccgc
ctctttaatttgtcacgtctgtatgggagaggattggaggagaatgttattagtccattt
gcactttttcaatgtcacaccaatagggtcaaaaaattagctgtggaagttggaaaccct
aatgtggtgtggagtgccagtgaagatgggacactgaggcagcatgatctccgtgagggt
gtttcatgtcctcctgctgggtcctctcaccaagaatgtcgtaatattcttcttgattta
cgttgtggagctaaaaaatcattggcagatcctcctaagcagtcactcgctctgaagtct
tgtgacatcagtcctactaggcctcatttgctccttgttggtgggagtgatgcatttgct
cgtctgtatgatagacgaatgctgccaccactgtcatctagtcagaaaatgttgccgccg
cctccttgtgttaactacttttgcccaatgcatctttctgattgtggacattcgagcttg
catcttactcatgtcactttcagtactaacggagaggaggttcttattagttacagtggg
gagcatgtgtacctgatggatgtcaatcctgcagctcttggaagtgaaatgaggtatacc
tcaggagatgtctcaaaggttatgagctttaatcccatgatcagcggagtaggattgctc
tcatctgtttctggtgtattttctaatggttttcctgtaagaaaccgagtggctgccaag
cttgacaaatgcagaaagctggttcagattgcagaaaaatccttaaaagaaggaacaaat
ttttactatggagttgaggcttgtaatgaagttttggacggtcatggtcatgagattggg
cctactctagtacatgagtgtttgtgtatacgtgcaaccttgctgctcaagcggaagtgg
aaaaatgatgcatacatggctatcagggactgtcatagagctcggaaaattaatccttct
tcatttagagcattgatttgtatgtctgaggcattatcacaggtggggaaacatgaagca
gctttggagtttgctgatgctgcaagatctctggctccatctgattttgaagtcggagaa
aaagtggacaacataaaaaggcatatcgatgcagcagaagttgagaaagctaaaaaggaa
aataatagaggatctaagtccgtacatcgagcaggaagtgtactatctatgagtgatata
atctatcgtcccgagggaaatggtgatgcttcacaagatggccctgaaagagaagattca
gatttagatgaagaattggaatttgattttgaaacatcagtatctgatgaaggacatgat
tttgactctaatgttcttcatggaagtttaaattttagaatacacatgagaggtgactca
gcaacagaaactggaagaccaaatggtgcttctgggttgcctacaccgtcatgtcaaagc
aataaagtgccttaccagcctgagagtgtgacagatatgaaacaaatatatgttggccat
tgcaatataggcactgacataaagcaggctagttttcttggtcaaaaaggtgaatacatt
gctagtggaagtgacgatggtagatggtttatatgggaaaaaagaactggcagattatta
aaaatgctgcatggggatgaagctgttgtgaactgcattcagtgccatccacttgattgt
gttgttgcaactagtgggattgatagcaccataaagatttggactccaagtgcttcagtc
ccatccattgtatctggtggagccgcaggaccagaggctccaaatgtgttagatgctatg
gaaagcaatcagcgcacattatgccgcactcgtgaaacatttttgccatttgagattttg
gagcggtttcggatgcatgagtttactgaaggaagtttgcatccatttgagtgcacacaa
agctga
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