Olea europaea var. sylvestris (wild olive): 111395304
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Entry
111395304 CDS
T05244
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111395304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111395304
03110 Chaperones and folding catalysts [BR:
oeu03110
]
111395304
03029 Mitochondrial biogenesis [BR:
oeu03029
]
111395304
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oeu04147
]
111395304
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
111395304
Messenger RNA biogenesis [BR:
oeu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
111395304
Chaperones and folding catalysts [BR:
oeu03110
]
Heat shock proteins
HSP60 / Chaperonin
111395304
Mitochondrial biogenesis [BR:
oeu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
111395304
Exosome [BR:
oeu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111395304
Exosomal proteins of other body fluids (saliva and urine)
111395304
Exosomal proteins of breast cancer cells
111395304
Exosomal proteins of colorectal cancer cells
111395304
Exosomal proteins of bladder cancer cells
111395304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Mito_fiss_Elm1
Motif
Other DBs
NCBI-GeneID:
111395304
NCBI-ProteinID:
XP_022877054
LinkDB
All DBs
Position
6:24804000..24809236
Genome browser
AA seq
578 aa
AA seq
DB search
PLPAVAFTSKSLPIRITKKPSGSLLNASAMAKELYFNHDGSATKKLLAGVNKVAQLIGVT
LGPKGRNVVLQNKYGPPKIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGCT
TSIVLAQGLIAEGIKVTAAGMNPIQISHGIEKTAKALISELKLMSKEVEDHELADVAAVS
AGNDYAVGDMISDALRQVGRMGVVTIEKGNYAENSLRIVEGMQFDRGYLSPYFVTDRQKM
TVEFYDCKLLLVDKKISNPRELFKILENAAKDKYPILIVAEGIEQEALAPIIRNKLRGVL
KVAAIKAPAFGERKSHYLDDIAILTGGTVIRDDMGLTLEKVHKDMLGSASKVVVTKDSTL
MVTDGRTQEAVKVRVSQIQRLVENTDEKFQKKILNERIARLSGGIAILQVGAQTQIELKD
KLLRVEDALNATKAAIEEGIVVGGGCCLLRLSTKVDSIREHLDNDEQKIGADILKRALAY
PARQIAKNAGVNGNTVIQEVLSSDDIRYGYNAAKNRYEDLMAARILDPSKVVRCCLEHAT
SVAKTFLTSDAVVVEIKEPAPKRIRKPMPTSGIGPIGI
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
ccattgcctgcagttgccttcaccagcaaatcactgcctattaggattaccaagaaaccc
tcaggttccttgttgaatgctagcgccatggctaaagaactgtatttcaaccatgatggt
tcagccaccaaaaaactcctggcaggggttaataaggtagcacagctgattggtgttact
ttgggtccaaagggaaggaatgtggtattgcaaaacaagtacggacctcccaagattgtc
aatgatggtgaaactgttcttaaagagattgagctggaggatcctcttgaaaatgtggga
gtaaaattggtgaggcaagctggggcaaaaacaaatgatcttgctggcgatggttgcact
acctccatagtgctagctcagggtcttattgctgaaggcataaaggttactgcagcagga
atgaacccaattcagatctcgcatgggattgagaaaaccgctaaagccctcatttctgaa
ctaaaattaatgtccaaagaggttgaggatcatgaacttgcagatgttgctgctgttagc
gcaggaaatgactatgctgtgggggatatgatttccgatgctctccgacaagtaggaaga
atgggtgttgtcacaattgagaaagggaattatgctgaaaacagtttacgaattgttgaa
ggaatgcagtttgatcgtggatatttgtctccttattttgtcactgaccgtcaaaagatg
acagtagagttttatgattgcaaattgctattggttgacaaaaaaatctcaaatccaagg
gagttgtttaagatattggagaatgctgccaaagataagtaccccattttgatagttgca
gagggcatcgagcaggaagctctggctccgataattaggaacaaattgaggggcgtattg
aaggtagctgcgattaaagctcctgcatttggtgagcgcaaaagccactatttggatgac
attgccatcttgacaggaggaactgttatccgggatgacatgggattgacacttgaaaag
gttcacaaagatatgttggggtcagcttctaaagttgtagtaactaaggattctacatta
atggttacagatgggcgtacacaagaagctgttaaagtaagagtttctcagatccaaagg
cttgtagagaacactgacgaaaaatttcaaaagaaaatactgaatgaacgtatagccaga
ttatcaggtgggatagcaattcttcaggtgggagcacaaacacagatcgagttgaaggat
aaactactaagagttgaagacgctctaaatgcaaccaaggcagcaattgaggaaggaata
gtagttggcggtggttgttgcctcctcaggctttctacaaaggttgatagtatcagagaa
catttggacaatgacgagcaaaaaataggagcagacattttaaaaagagccttggcctat
cctgcaagacagatagccaaaaatgctggtgtaaatggaaacactgtcatacaggaggtt
ctgtcatcagacgacataaggtatggatacaatgctgcaaaaaatagatatgaggatttg
atggctgctagaatactggatccttcgaaggttgttagatgttgcttggagcatgcgaca
tctgttgccaagacctttttgacatctgatgcagtagttgttgaaattaaggaacctgca
cctaaacgtataagaaaaccaatgccaacctcaggtattggaccaattggcatttaa
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