KEGG   Olea europaea var. sylvestris (wild olive): 111395491
Entry
111395491         CDS       T05244                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu04120  Ubiquitin mediated proteolysis
oeu04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111395491
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    111395491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oeu04121]
    111395491
Enzymes [BR:oeu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111395491
Ubiquitin system [BR:oeu04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111395491
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     111395491
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_EIPR1 zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_HPS5 zf-C3HC4 WD40_like Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_DCAF12 zf-C3HC4_3 zf-RING_2 Beta-prop_IFT140_1st zf-RING_UBOX Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st zf-C3HC4_4 U-box zf-RING_5 DUF1664 zf-Nse zf-rbx1 YpoC zf-RING_6 Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 111395491
NCBI-ProteinID: XP_022877277
LinkDB
Position
6:2421203..2439827
AA seq 669 aa
MRESSIGAVVPAMKKPEEETTITSTTTTTRGNIDAEAEVADKELLCPICMQMIKDAFLTA
CGHSFCYMCIVTHLRNKSDCPCCFNSLTPDQLFPNFLLDKLLKKTFARQLSKNSSPVEQF
RQSLEQGCEVSIKELDTLLSLLADKKRRMEQEEAERNMQILLDFLHSLRKQKVNELNEVQ
NDIQYAKEDINAVERHRIELYRARDKYSVKLQLLGDDPMGLKCPTSSNRISTSHLSSGNE
RGILSENFLHKKVEGKAQRSFLGPQGNDISSSGPTLQHLSQSGLAIKQKKRVHSQFNDLQ
EFYLQKRRQSACHLSSQEKNDKSIIHREGYNAGLADVQSVLSTFTRYSRLRVIAELRHGD
LFHSTNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEHTDVHCPVVEMSTRSKLSCL
SWNKYSKNLIASSDYEGIVTIWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDC
KVKVWCTKQEASVLNIDLKANICCVKYNPESSLYVAVGSADHHIHYYDLRNTCHPIHVYS
GHKKAVSYVKFLSDNELASASTDSTLRLWDVKENSLVRTFRGHTNEKNFVGLTVNKDFLA
CGSETNEVCVYHKALARPMTSHKFGSPDMEETDEDAGSYFISAVCWKSESPTMLAANSQG
TIKVLVLAA
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgagggaaagctcaatcggagcggtggtgccggcgatgaagaagccggaggaggaaact
acaataacatcaacgacaacaaccaccagaggaaatatcgatgcagaggcggaggtggcg
gacaaggaattgctttgcccaatttgtatgcagatgataaaggatgctttcttaacggca
tgtggccatagcttctgctatatgtgcattgttactcatctccgcaataagagtgattgc
ccttgctgttttaactcccttaccccagatcaactattccccaattttcttctcgataag
ctattgaagaagacatttgcccgacaattatcgaaaaattcatcccctgtagaacaattt
cgtcagtcattggaacagggttgtgaagtttcaataaaggagctggataccctgctgtct
cttctggcggacaaaaagagaagaatggaacaagaagaggcagagagaaacatgcaaatt
ctgctggacttcttacacagcttaaggaaacaaaaagttaatgagctcaatgaggtacaa
aatgacatccagtatgctaaagaagacataaatgctgtggaaaggcataggatagagcta
taccgtgcgagagacaagtactcagttaaactgcagttacttggtgatgatcctatggga
ttgaaatgtcctacatcgtccaatagaattagtactagtcatttaagctctggaaatgaa
cgaggaatactctctgagaactttctgcacaaaaaagtggagggaaaggctcaacgtagc
ttccttggaccccagggaaacgacatatcttcaagtggtccaactttgcagcatttgagc
caatctggcctggctataaaacagaaaaagcgtgtccattcacagtttaatgatttacaa
gagttttacttgcaaaagagacgtcagtcagcctgccatttatcctcccaagaaaagaat
gataaaagtattattcacagagaaggttataatgctggtcttgcagatgttcaatccgtt
ctaagcacattcacacgatacagtcgattaagggtgattgctgaacttaggcatggggat
ctctttcattccaccaacattgtttcaagcatagagtttgatcgcgatgatgagctgttt
gctactgctggagtttcacgatgcataaaagtttttgacttctcttcggttgtaaatgaa
catacagatgtgcactgccctgttgtggagatgtcgacacggtctaagctgagctgcttg
agctggaacaaatatagcaaaaaccttatagctagcagcgattatgaaggaatagtgact
atttgggatgtaactactagacagagtcttatggaatatgaggagcatgagaagcgcgct
tggagtgtagatttttcacgaactgaaccgtcaatgctagtttctggtagtgacgattgt
aaggtcaaagtatggtgcactaagcaagaagctagcgtcctcaacattgatctgaaggcc
aatatatgctgtgtaaaatataatccagagtctagcctatatgttgcggttggctctgca
gaccatcacatccactattatgatttaagaaacacctgtcatccgattcatgtgtacagt
ggccacaaaaaagcagtttcatatgtaaaatttttgtctgacaatgagcttgcttctgca
tcaacagacagcactcttcgattatgggatgtcaaagaaaattcgcttgttcgtacattt
agagggcacacgaacgagaagaattttgttggtctcacagtaaataaagatttcctcgct
tgtggcagtgaaacaaatgaagtgtgcgtctaccataaggctcttgctagacccatgaca
tcgcataaatttggctctcctgatatggaagaaactgacgaagatgcaggatcttacttc
atcagtgcagtctgctggaaaagtgaaagtcccactatgttggctgccaatagtcaaggt
acaattaaagttttggtccttgcagcctga

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