KEGG   Olea europaea var. sylvestris (wild olive): 111395600
Entry
111395600         CDS       T05244                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111395600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111395600
   03041 Spliceosome [BR:oeu03041]
    111395600
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     111395600
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     111395600
Spliceosome [BR:oeu03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    111395600
SSDB
Motif
Pfam: RRM_1 RRM_7 AbiGi
Other DBs
NCBI-GeneID: 111395600
NCBI-ProteinID: XP_022877423
LinkDB
Position
6:5120576..5126008
AA seq 496 aa
MDPIKKRKMDDNGVITVDTDAFIPYKLTLDDARKIIEPFPHEQLLEIVQNAVLRHPDVLD
AVRSIADRDMTQRKLFIRGLGWETTTDKLRALFSGYGELDEAVVILDKATGKSKGYGFIT
FKHVDGAMLALKEPSKKIDGRMTVTQLAAAGMSGGSGPGVGGIGGGNNHVDVSARKIYVA
NVPYDMPAERLLQHFSMYGEIEEGPLGFDKATGKSKGFALFVYKTAEAARASLVDPIKNI
DGHQLNCKLAIDGKRGKVPGIGVAGPVGAQQVGSADGMGATMPGGQYGGIGGQYTGFSGP
LGAGGGVGGQAIPAVGSQAAGMNLGGGGGFGSGLGGPYAGGTNSVGPGATGYNGLGIAGS
GLGGAGDGYGGVRAGLGGSGGGPGGIGGGMGGGTGGVGGGLGGGQVGVGSGLGGGQGGVG
GVLGGVGSGSGGAGRGSSLYGLPPSSAGAGSGDYPRSAQYSLSSGGYQSQHNQPAGTSPA
PRVPPGGMYQGMHPYY
NT seq 1491 nt   +upstreamnt  +downstreamnt
atggatccgattaagaaacgcaagatggacgataacggtgttataacggtggatacagat
gccttcatcccttacaaactcaccctcgatgatgcacgcaaaattattgagccctttccc
catgaacagttgttggaaattgttcaaaacgccgttcttcgtcacccagatgtgcttgat
gccgttcggtcaatcgccgaccgggatatgacccagcggaagctgttcattcgtggactt
ggatgggagaccaccactgataagctacgcgctctcttctcaggatatggggagttagat
gaggcggtggttattctcgacaaggctacgggtaagtctaagggttatgggtttattact
tttaagcatgttgatggtgctatgttggctttgaaggaaccgagtaagaaaattgatggt
aggatgactgttactcagcttgcagcggctggtatgtctggaggaagtgggcccggggtg
ggtggtattggaggagggaataatcatgtggatgtgtcggcaaggaagatttatgtggca
aatgtgccgtatgatatgcctgctgagagattattgcagcacttttccatgtatggggag
atagaggaggggcctttggggtttgataaggcgacggggaagtccaaggggtttgctttg
tttgtgtataagacagccgaggctgctagagcttcacttgtggatcccattaagaatatt
gacgggcatcagctaaactgtaagctggcaatagatgggaaaagagggaaggttccgggg
attggggttgccgggcctgttggagctcagcaggtgggcagtgcggatgggatgggggca
acaatgccgggtgggcagtatggtgggattggtgggcagtatactgggttttcagggcct
ttaggtgctggtggtggtgtaggtggtcaggcgatcccagcggttggaagccaggctgct
gggatgaatttggggggtggtggtgggtttgggtctggactgggtgggccttatgctggt
gggaccaattctgttgggcctggtgcaactgggtataatggactgggcattgctggttct
ggtttaggtggtgctggtgatggatatggtggggttagagctggattggggggttctggt
ggtggaccgggtggaattggaggtggaatgggtggtggtacaggtggagttggaggtgga
ctgggtggtggacaagttggagttggaagtggactgggtggtggacagggtggagttgga
ggtgtactgggtggtgttggcagtggatcgggtggtgcaggtcgtgggtcatccttgtat
ggtttgccaccaagctcagctggggcaggttcgggagattatccacggagtgcgcagtac
agcttgtcatctggtgggtatcaaagccaacataatcagccagcaggaacatcaccagca
cctagagttccgcccggaggaatgtaccaggggatgcatccttactattaa

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