Olea europaea var. sylvestris (wild olive): 111395626
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Entry
111395626 CDS
T05244
Name
(RefSeq) protein SPA1-RELATED 4-like
KO
K26557
protein SPA1-related 3/4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111395626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111395626
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
111395626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Pkinase
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_RFWD3
PK_Tyr_Ser-Thr
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_2nd
WD40_like
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
111395626
NCBI-ProteinID:
XP_022877478
LinkDB
All DBs
Position
6:complement(5730883..5736373)
Genome browser
AA seq
845 aa
AA seq
DB search
MGGSSKSGRQMSNSSRELSSSSDFDRNSRIIHARNIKSSGDNTTQESGFMSGGKGRERSL
WPLTTRYRTQVGDSEDSASMGPLNKTVQSSDVNLRQWLDNPERKVDAPECLQIFLQIVDF
VNLAHSQGIVVRNVRPSCFVISLFKRVSFIESVPFLDAGSDFLEDRSNSQAADIKGRVIY
ASEASDNERTEDYKYYFPMRQILLMESNWYSSPEELSGGTNSSASDIYQLGVLLFELFCT
FSSLEEKSTTMASLKHRVLPPQLLLNWPKEASFCLWLLHPEPSSRPRMSEVLQSDFLNEP
RDSIEEQEAAMELREKIEEQELLLEFLMVTQQRKQDAADSLHETISFISFDIEEVTKLLM
ALRAKGGSSMELGKNSTSGPERIITDDDDSGSSVSRKRFRQGLYNNNPEESGDQADEHQK
SEMPSGPQGNVLSKSSRLMKNFRKLESAYLLTRRRSVKPVARPLTQHFPVSSNVRGSMAV
TEKSSISNLSTKERYSESRQGGWVDTFLEGLSKYLSFSKLKVKADLKQGDLLNSSNLVCS
LSFDRDGDFFATAGVNKKIKIFEYNSIINEDLDIHYPVVEMTSRSKLSNLCWNGYTKSLI
ASSNFEGVVQVWDVTRSHIFMEMKEHEQRIWSIDFSVADPKMLASGSDDGSVKLWNINQG
VSVGTIRTKANVCCVQFPVDTGHSLAFGSADHRIYLYDLRNLKMPLCTLVGHNRTVSYVK
FIDSSTLVSASTDNTLKLWDLSMCTSRVLDYPLQSFTGHLNIKNFVGLSVSEGYIATGSE
TNEVFVYHKAFPMPVLSFKFTGTDSLCVDNMDGTAQFISSVCWRGQSTTLVAANSMGHIK
LLEMV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggaggctcatcaaagtctggtcggcagatgtctaatagttctagggaattgagttct
tcgtcggactttgatagaaattctaggattatccatgcaagaaatatcaagtcctcaggt
gacaatacaacccaagaatctgggttcatgtccggaggaaaggggagggaaagaagtctc
tggccactcaccacccgctatagaacacaagttggagactctgaagattctgcctctatg
gggcccctcaacaaaactgtgcaatccagtgatgttaatttgagacaatggttagataat
ccagaaaggaaagtggatgctcctgaatgccttcaaatatttttgcaaattgtggatttt
gttaacctggcgcattctcaaggaattgttgttcgcaatgtgcggccatcttgctttgtc
atttccttgtttaagcgagtctctttcatagagtctgttccttttctggatgctggttca
gattttctcgaagacaggtccaacagccaagcagccgacattaaaggtcgggttatttat
gcttcagaagccagcgacaatgagcgaacagaagattataagtattacttcccaatgaga
caaatattgctcatggaatccaattggtacagcagtccagaagaactttctgggggtact
aattctagtgcttcagacatttatcaactcggagtccttctgtttgaactattctgcaca
tttagctctctagaagaaaaaagcacaactatggcaagcctgaaacatcgtgtccttcct
cctcagttgcttctgaattggcctaaagaagcttcattttgcttatggttgctgcatcct
gagccgagtagccggcctagaatgagtgaggtgttgcaaagtgattttttgaatgaacca
agagatagcatagaagaacaagaagctgctatggagctcagagaaaaaatagaggagcag
gaattattgttggaatttcttatggtgacacagcaaaggaaacaggatgctgcagatagc
ttgcatgagacaatctcctttatatcttttgacatagaagaagtcacaaaactgcttatg
gctctcagggcaaaaggaggttcgagtatggagttggggaagaattcgacttcaggtcca
gagagaataattactgatgatgatgattctggtagctcagtttctagaaagcgtttcagg
caggggctttataacaataacccagaagaatctggtgaccaggcagatgagcatcagaaa
tcagaaatgccttctggaccacagggaaatgttctctccaaaagttctcggctgatgaag
aatttcagaaaattggaatcagcttaccttttgacaagacgcaggtctgtcaaaccagta
gccagaccattgactcaacattttccagttagcagcaatgtcaggggatctatggcagtc
actgaaaaaagttcgattagtaatctttcaactaaagaacggtatagtgagagtaggcaa
ggtggatgggtggatacatttttagagggattatcaaagtatctctcctttagtaagctg
aaagttaaggctgacttgaagcaaggggatcttttaaattcatccaacctggtgtgctcg
ctgagtttcgaccgcgatggtgatttttttgcgactgctggtgtaaacaagaagatcaaa
atttttgaatacaattcaatcataaatgaagatcttgatattcattatcctgtggtggaa
atgacaagtagatcaaagcttagcaacctatgttggaatggctataccaaaagcctgatc
gcttcgagtaactttgaaggggtggtgcaggtatgggatgtcacgagaagccatattttc
atggaaatgaaagaacatgagcagcgtatatggtctattgacttctcagtggcagatcca
aaaatgctggccagcgggagtgacgatggctctgttaagctctggaatatcaatcaggga
gtaagtgtcggtaccattagaacaaaggccaatgtttgctgcgttcagttccccgtggat
actggccattccctggcttttggttcagctgaccatagaatatatttatatgatctacgt
aacttaaaaatgcctctatgcacgttagttgggcataatagaactgtgagctatgtgaag
ttcatagattcatctactcttgtttcggcatctacggataacactttaaagctttgggat
ttgtcaatgtgcacatcaagagttctagattatcctctccaatcatttacaggacacctt
aatataaagaattttgttggcttatccgtatcggaaggttatattgcaactggctcggaa
acaaatgaggttttcgtctaccataaagctttccccatgcctgtattatcatttaaattt
actggcacggattcactttgtgttgataacatggatggcaccgcccaatttatctcatcg
gtctgctggcgtggtcagtcgaccaccttagttgcagcaaattccatgggacatattaag
cttttggagatggtttaa
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