Olea europaea var. sylvestris (wild olive): 111395770
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Entry
111395770 CDS
T05244
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111395770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111395770
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111395770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
RRM_Nup35
SET1_RBD
zf-C2H2_3
Motif
Other DBs
NCBI-GeneID:
111395770
NCBI-ProteinID:
XP_022877676
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Position
6:complement(9506895..9511269)
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AA seq
476 aa
AA seq
DB search
MESDQGKLFIGGISWNTDEDRLKEYFGAYGEVIQAVIMKDRITGRARGFGFVVFADPAVA
QRVVKEKHTIDGRTVEAKKAVPRDDQHLVNRNSSSTQESPGSGRTKKIFVGGLASTVTES
DFKNYFDQFGTIVDVVVMYDHNTQRPRGFGFITYDSEDAVDRALHKNFHELNGKMIEVKR
AVPKEFSPGPNRSALVGYNYGLNRANNLLNSFSPGYNLNSLGAYGVGVDGRYNPLASSRS
GFSLLGSRAYGMGVNMDQGLNAVLGGGSNFSRNLGYGHILNPYFGNNQSRYNVPIGYSTG
SSRGDSTYNMSSRNLWGNSALNTSTTNGSSGSYFGSGSGGFGVFGNNGANWGTAHIAASL
GGSSSGFSDGNVGYRGGENSYAIGTGGYGRNSGTVVPTASSFATSSGNYEGSYGDFYRSG
SVHGDPTWQTMSSELENSGSFRYGLGNSEDVSVNDSDDFGVGYNIASRQSTKGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatcaaggtaaactatttattggcgggatttcctggaacacagatgaggat
cgtcttaaagaatattttggtgcatacggagaagtcatacaggcagtgatcatgaaagat
cgtatcactggccgtgctcgtggctttggttttgtggtctttgctgaccctgcagttgct
caaagagtggttaaggaaaagcataccattgatggacgaaccgtggaagcaaaaaaagct
gttccaagggatgatcaacacttggtaaatagaaacagtagtagcactcaagaatcacca
ggttctggacgaactaaaaagatttttgtaggaggcctagcatcgaccgtaactgaaagt
gactttaaaaattactttgatcaatttggtaccatagtggatgttgtagtgatgtatgac
cacaacactcaaaggccaagaggtttcggatttataacatatgattccgaggatgcagtg
gatagagcattgcacaagaattttcatgaactcaatggtaagatgattgaggtaaagagg
gctgtaccgaaagaattttctccggggcccaaccgaagtgcccttgttgggtacaattac
ggtttaaatagagccaacaacttactgaatagcttttccccgggatataatctgaactct
cttggagcctatggtgttggggtggatgggaggtataatccacttgctagttctcgttcc
gggttttcacttttaggttctcgtgcatatggaatgggcgtcaatatggatcaaggattg
aatgctgtgcttggagggggttcaaacttcagcagaaatcttggttacgggcacattcta
aacccctattttggtaataatcaaagcaggtacaatgttcccattggttatagcacaggt
agtagtcgaggtgattccacttacaatatgtcatccagaaatttgtggggaaatagtgcc
cttaatacttctacaactaatggtagctctggttcatactttggttcgggaagtggcggc
tttggagtctttggaaataatggtgcaaactggggaactgctcatattgctgcgtcactt
ggggggagttcttctggcttctctgatgggaatgttggctatagaggtggagaaaacagt
tatgcaattggaactggaggatatgggaggaacagtggcacagttgtgcccacagcatct
tcatttgccacatctagtggaaattacgaaggatcttacggagatttttaccgtagtgga
tcagtgcacggggatccaacatggcaaacaatgtcttctgagctagaaaattcgggttca
tttcgttatggactgggaaattcagaagatgtctctgtcaatgattctgatgattttggg
gttggctataatattgcaagtagacaatccactaaaggaattgctgcatag
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