Olea europaea var. sylvestris (wild olive): 111395944
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Entry
111395944 CDS
T05244
Name
(RefSeq) putative pectate lyase 2
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu00040
Pentose and glucuronate interconversions
oeu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111395944
Enzymes [BR:
oeu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
111395944
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
111395944
NCBI-ProteinID:
XP_022877946
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Position
6:14279949..14281801
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AA seq
382 aa
AA seq
DB search
MASTATLRLILSLLVLSISPLEADYYSPNYSNKKVLNFIDSCWRSKANWAANRRALADCA
VGFGQNAIGGKNGATYVVTDPSDDPINPKPGTLRYGAIQSNPLWIIFAKDMVITLKNELM
INSFKTIDGRGVKVEIAYGPCITIQYVSHVIIHGISIHDCKPGKSGLVRNSPTHVGHRKG
SDGDAIDIFGSTDIWIDHCFLARCTDGLIDVIHASTSITISNNFFQQHDKVMLFGHDDMN
TEDKVIKVTVAFNHFGPGLVQRMPRVRLGYSHVANNRYDMWEMYAVGGSANPTIFSEGNY
YMAPKNTKAKQITKREVKNGWKNWKWRSSKDKFLNGAYFIQSGWGTCAPGYTKSQAFRVA
DGSKVLALTSDAGPLRCSTEIC
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacagccaccctccggttgattctcagtcttctagttttaagcatatcccca
ttagaagctgattattactctcctaattattcaaacaagaaagtcttgaattttatagac
tcttgttggcggagcaaagccaattgggcggccaaccgccgtgcattagcggattgtgcc
gttggctttggccaaaacgctatcggagggaagaatggtgccacctacgtggtaacagat
ccgtcggacgatcccataaatcctaaaccaggcacacttcggtacggtgcaatccaatca
aatccgttgtggattatctttgcaaaagacatggtaatcactcttaagaatgagcttatg
ataaatagttttaagacaattgatgggagaggggtcaaagtagaaattgcttatgggcca
tgcattacaatacagtatgttagccatgttattatacatgggattagcattcatgactgt
aagcctggaaagtctggccttgttcggaacagcccgacccatgttggccaccgcaaaggc
tctgatggagatgccatcgatatatttgggtcgactgatatatggattgaccactgtttc
cttgcgcgctgcaccgatggcctaattgatgtgattcatgcttcgacatccatcaccatc
tctaacaatttctttcaacaacatgacaaagttatgttatttgggcatgatgatatgaat
acggaggacaaagttatcaaagtgacagttgcgttcaatcatttcggacctggtttagtt
caaaggatgcctagggtcagactaggttactctcatgtagccaacaatagatacgatatg
tgggaaatgtatgctgttggtggcagtgctaatccaaccatctttagtgaaggaaattac
tacatggctccgaaaaacacaaaggcaaaacaaattacaaagagagaggttaagaatggg
tggaagaactggaaatggaggtcatccaaggacaaatttttgaatggagcttattttatt
caatcaggatggggaacttgtgcacctggttacaccaagtcccaggcatttcgtgtcgct
gatggatcgaaggtgctcgctctaacgtccgatgcaggccctttgagatgcagtactgaa
atttgttga
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