Olea europaea var. sylvestris (wild olive): 111396185
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Entry
111396185 CDS
T05244
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111396185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111396185
Spliceosome [BR:
oeu03041
]
Complex C
Other components
Step II factors
111396185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_Vps41
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
111396185
NCBI-ProteinID:
XP_022878294
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Position
6:complement(22531949..22535820)
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AA seq
599 aa
AA seq
DB search
MDLLQSYKDPDMEEEDDEVERQSDSRPATTTTSDQDPSPDSSPIRISLPSKSTAPKIDDT
MLSLTVAGKLQSEAKKPLNPTQHVVSFNPTYDQLWAPVVGPAHPYAKDGLAQGLRNHKLG
FVENAAIEPFVFDEQYNTFYKFGYAADPTENNYVGDVEALKQYDGVSVYNIPQHEQKKRK
LEKKKETLEQLENEGNDLMDSEEVDNPATEAWLTKNRKSPWAGKREWLQGELTEEQKKYA
EEHAKKKGEKEGGEKEKGEAHADKSTFHGKEERDYQGRSWIEPPKDAKASNDHCYIPKRL
VHTWSGHTKGVSAIRFFPKFGHLILSAGMDSKVKIWDVFNSGKCMRTYMGHTKAVRDIWF
CNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVRLNPDEDKQNVLLAGMSDKKI
VQWDMNSGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPH
MHSMPSISLHPNTNWLACQSLDNQIIIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDG
RFVMSGDGEGRCWFWDWKSCKVFRTLKCHEGVCIGSEWHPLEQSKVATCGWDGLIKYWD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggatttgctgcaatcgtataaagacccggacatggaagaagaagatgatgaagttgaa
cgccaatcagattcccgaccggcaacaacaacaacatcagaccaggacccgtcgcccgat
tcctccccaattcggatctcccttccctccaagtccaccgctccgaaaatagacgatact
atgctgtctcttaccgtcgctggcaagttacaatctgaagctaaaaaacccctaaatccg
acccagcatgttgtttcgttcaaccccacgtatgaccaactttgggccccagtcgttggc
ccggctcatccctatgccaaggatgggcttgcgcaaggtctccgtaatcataagcttgga
tttgttgagaatgctgctattgagccgtttgtgtttgatgaacagtataacactttttat
aaatttgggtatgcggcagaccctactgagaataattatgttggggatgttgaagctttg
aagcaatatgatggtgtttctgtgtataatataccgcaacatgagcagaagaagcggaaa
ctagagaaaaagaaagagacgttggagcagctggagaatgaggggaatgatctgatggat
tcagaggaggtggataatccggcgactgaggcatggttgacgaagaataggaagagtcca
tgggcaggtaagagagagtggctgcaaggggagctgacagaggagcagaagaaatatgct
gaggagcacgcgaagaaaaagggtgagaaggaagggggcgagaaagagaaaggtgaagcc
cacgctgacaagagtacttttcatggaaaagaggagagggattatcaagggaggtcgtgg
attgagcctccaaaggacgccaaggctagcaatgatcattgttatataccgaagagattg
gttcacacatggagtgggcataccaagggcgtttccgctattcggtttttcccaaagttt
ggtcacttgatattgtctgcaggtatggattcaaaggtgaagatatgggatgtgtttaat
tcaggaaaatgtatgaggacttacatggggcatactaaggcagttagggatatttggttc
tgtaatgatggaagtaaattcttgacagcaggatatgataagaacataaagtattgggat
acagagactggacaagttatatcaactttttcgactgggaagattccgtatgtagtgaga
ctcaatccagatgaggataagcagaatgtcttgttagcgggaatgagtgataaaaagatt
gtacagtgggatatgaattctgggcagattacacaggagtatgatcagcatttgggtgca
gtgaatacaattacttttgttgataataatcggaggtttgtgacttcaagtgatgataag
tcattacgtgtctgggagtatgggattcctgttgtgattaagtatattagtgagccacat
atgcattcaatgccatctatatctttgcaccccaatacgaactggcttgcatgtcagagt
ttggataatcagataattatatacagtactagagagagatttcagttgaacaaaaagaag
aggtttgcggggcacatcgtggcgggatatgcttgtcaggttaatttttcgcctgatggg
cgatttgttatgtccggagatggtgaaggacgatgctggttttgggattggaagagttgc
aaggtttttagaactttaaagtgccatgagggagtttgtataggttctgaatggcatccg
ttggaacagagtaaagttgctacctgtgggtgggatggcttgatcaagtactgggactaa
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