Olea europaea var. sylvestris (wild olive): 111397074
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Entry
111397074 CDS
T05244
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111397074
Spliceosome [BR:
oeu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
111397074
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_10
DUF8400
DUF4523
Motif
Other DBs
NCBI-GeneID:
111397074
NCBI-ProteinID:
XP_022879556
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All DBs
Position
7:13787474..13801295
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AA seq
472 aa
AA seq
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MSTSGQQQFRYTQTPSKVLHLRNLPWECTEEELVELCKPFGKIVNTKCNVGANRNQAFVE
FVDLNQAINMVTYYASSSEPANVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQYSDVQTAATARESLDGRSIPRYLL
PGHVNECHLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPTAMEGIVQPIVGPDGIKKEF
ESNVLLASIENMQYAVTVDVLHSVFSAFGTVQKIAIFEKNGGTQALIQYPDITTAAVAKD
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTVPESLAMHQAPGVPAPTSGWLH
STAASVGPGIGYASGGALPVQSPLAPVSWDTASQTGRPTFMSGPSTFPGQTYASTSVPAY
SSAAIPPGSSPLPQTNHITSGAPPMRVTQPMHQSNVLPGGISPPGQPPYYAP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgggacagcagcagttccggtacacgcaaaccccgtcaaaggttctccac
ctgcggaatctcccgtgggagtgcaccgaagaagagctggtcgaactgtgcaaacccttc
ggcaagattgtcaataccaagtgcaatgtcggcgccaatcgcaaccaagcttttgtcgaa
ttcgtggatcttaatcaggcaattaacatggttacgtattatgcttcgtcttcagaacct
gcaaatgttcgtggcaaaactgtctatatccagtactctaacagacatgaaattgtcaac
aacaagagtcctggagatgttccaggcaatgtcttgcttgttacaattgagggagttgaa
gctggtgatgtcagcattgatgtcattcacttggtgttctcagcttttggttttgtgcac
aagattgctacttttgaaaaggctgctggttttcaggctttaattcaatatagtgatgtt
cagactgcagctacagcaagggagtcattggatggcaggagcatacccagataccttctt
cctggacatgttaatgaatgtcatttgcgtatctcgtactctgcacacaccgatttgaat
attaagtttcaatctcatagaagcagggattatacaaatccttatcttcccgttaatcct
actgcgatggaaggtattgttcagcccattgtaggtccagatggaataaaaaaggaattt
gagagtaatgtgcttcttgcatccattgagaatatgcaatatgcagtcactgtggatgtt
cttcactcggtattctctgcatttggtactgtccaaaagattgcaatatttgagaagaac
ggtggaactcaggcactaattcagtatcccgatatcacaactgcagctgttgccaaagat
gcattagagggtcattgcatatatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcatacagtgacaaaagtagagattacactgtccct
gaatcacttgcaatgcatcaagctccgggcgttcctgctccaacttctgggtggctacat
agtactgcagcttcggtcggccctgggattggttatgcttctgggggtgctttaccggtt
cagtctcctctggcaccagtgtcgtgggatacagcgtcgcagacaggtagaccaaccttc
atgtctggtcccagcacatttcctggtcaaacatatgcatcaacttcagttcctgcttat
tcctctgcagcaattccacctggttcctcaccacttcctcaaacaaaccatatcacttct
ggtgctccaccgatgagggttactcagcctatgcatcagtcaaatgtgctacctggcggt
atttcaccaccaggtcaacctccttactatgctccatga
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