Olea europaea var. sylvestris (wild olive): 111397445
Help
Entry
111397445 CDS
T05244
Name
(RefSeq) pre-mRNA-processing protein 40A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111397445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111397445
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111397445
Complex B
111397445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
111397445
NCBI-ProteinID:
XP_022880157
LinkDB
All DBs
Position
7:complement(21957596..21973379)
Genome browser
AA seq
1008 aa
AA seq
DB search
MASNPPSSGAQSLWPPVAGSMPPQSFGPPFPMQFRPPTPHGQQFIPPPATQQFHPVGQTQ
HVGLPPGQSQPPQFSQPMLQFLPRSSQPGYDTPTSYAQPSIPITSGAPQSQPAGPSPGIS
YSSPYTFTPSFGQPQNSINTTSQFQPASQVSAPVGPTSGQPWLHSSQGASVVAPLQQTSQ
QLLVTGLTAATVPAVNGPNTTQQSASDWQEYEAADGRRYFYNKVTKQSSWEKPRELMTPL
ERADASTVWKEFTTPEGRKYYYNKETKQSKWTIPDELKLAREEAEKEAAKGAHTSSTVPT
SATGTSVEQLSASVNTVSSTKTTMSGVTSSPVMVASITDANASPVMVSGSSATPTTHAAP
TSAVGVPLAGETVVLSPFNPTPVSNMESSSSIIEASLGGASLQDMEEAKKGMAAAGKINV
TPVEERSLDDEPIVYANKQEAKNAFKALLESANVEADWSWEQAMRVIINDKRYGALKTLG
ERKQAFNEYLMQRKKLEAEERRLRQRKAKEEFTKMLEESQELTSSTRWSKAVAMFEGDER
FKAVEREADREDLFRNYLVDLQKKEKIKAQEEHRQNRLEFRQFLETCAFIKVDTQWRKVQ
DLLEDDIRCTRLDKIDRLDIFQEYIRDLEKEEDEQKKRQKEQLRRAERKNRDEFRKMMED
HMASGTLTAKTHWLDYCKKVKDSEAYQAVALNTSGSTPRDLFEDVVEELEKKYDDDKARI
KDMLKLEKISVASTWTVEDFKSSIEPSSGSFSISDINFQLICEDLIERAKEKEEKEAKKR
KRLAKDFTDKLSTIKEINALSSWDESKQLVEDSSEYRSIGEESVCQEIFDEYVSRLQEKA
KEKERRREEEKAKKEKEREKEKRKDRERREREKEKDDKEKDKDREREKEKDKVKEHSKKD
EVESENMDVTESHSHRDDKRRDKDKERKHRKRHQSDDVSSDKDDKEESKKSRRHGSDRKK
SRKHAYSPESDSESRYKRHKREHRDGSSHNGGHEELEDGELGEDGEIQ
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaccctccatcttctggtgcacagtcactttggcctcctgtggctggatcc
atgccccctcaaagttttggtcctccctttcctatgcaatttcgtccaccaacaccacat
gggcagcaatttattcctcctcctgccactcagcaatttcatccagttggacaaacacaa
catgttgggttgcctcctggtcaaagtcaacctccacaattttctcaaccaatgctgcag
tttctgcctcgatctagccagccagggtatgatacaccaacttcatatgcccaaccaagt
attcctatcacatctggcgcgccacagtctcagcctgctggcccaagtcctggaatttca
tattcttcgccatataccttcaccccatcttttggccagccacagaatagcataaacacg
acttcccaattccaacctgcatcccaagtgtctgcacctgttggccctaccagtggacaa
ccttggttgcactctagtcagggtgcctcagttgttgcaccattacagcaaactagtcag
caattattagttacaggccttaccgctgctactgtgccggctgttaatggtcctaatacc
actcaacagagtgcttctgattggcaagaatatgaagctgctgatgggagaagatatttt
tacaacaaagtgacaaagcagtctagctgggagaagcctcgtgaattgatgacaccctta
gagagagctgatgcctcaactgtttggaaagagttcacaactcctgagggtagaaagtat
tactacaacaaggaaacaaagcaatctaaatggacaatacctgatgaattgaagttggcc
cgtgaagaggctgaaaaggaagctgccaagggagcacatactagctctactgtgccaacc
tctgctacaggcacttctgttgaacaactatctgcttctgtcaacacagtcagctccacc
aagacgacaatgtctggagtcacttcaagccctgtaatggttgcctccattactgatgct
aatgcttctccagtgatggtttctggatcatcagcgacccccacgacacacgctgctccc
acaagtgctgttggtgtgcccttagcgggagaaactgttgtgctatcaccttttaatcca
acaccagtaagcaacatggaaagttcatcctccattattgaggcttcgctcggtggggct
tctttgcaggatatggaggaggcaaagaagggaatggctgctgctggaaaaataaatgta
acgccagtggaggagagatcactggatgatgaacccatagtatatgctaacaagcaggaa
gcaaaaaatgcattcaaagcactattggaatctgcaaatgttgaggctgattggagttgg
gagcaggctatgcgagttattattaacgacaaacgatacggtgcacttaaaactctcggt
gaacggaaacaagctttcaatgagtacttgatgcaaagaaaaaaattggaggccgaggaa
agacgtctcaggcagagaaaagcgaaggaggagttcacaaagatgttggaagaatctcaa
gaacttacatcatccacccgctggagcaaagcagtggcaatgtttgaaggagatgagcgt
tttaaggctgttgagcgagaagcagaccgtgaggatctgtttaggaactacttggtagat
cttcagaaaaaggaaaagataaaggctcaagaggagcatcgacagaataggttggagttt
aggcaatttttggaaacctgtgcctttatcaaggttgatacccagtggcggaaagttcaa
gatctcttggaagatgatataagatgtacacgccttgataaaatagatcgcctcgatatt
tttcaggagtatatccgtgacttggagaaggaggaggacgagcaaaagaagagacagaag
gaacaattgagacgagctgagcgtaaaaaccgtgatgaatttcgcaagatgatggaagac
cacatggcttcaggcactcttacggctaaaactcattggcttgattattgtaaaaaggtc
aaggattctgaagcttaccaggctgttgccttgaacacctctggttctacgccgagggat
ttgtttgaggatgttgttgaagaattggagaaaaagtatgatgatgacaaagcccgtata
aaagacatgctgaagctggaaaagatatcagttgcatcaacatggacagttgaagacttt
aagtcctctattgaaccaagcagtggttcattttcaatatctgacattaatttccagctc
atatgcgaggaccttattgagagagcaaaggagaaagaagagaaagaagctaagaaacgt
aaacgtcttgccaaagatttcactgataaactgagcactattaaggaaataaatgccttg
tcgagttgggatgaatccaaacaacttgttgaggacagctcggagtacaggtccattgga
gaagaaagtgtctgtcaggagatatttgatgaatatgttagtcgcttgcaagagaaagcc
aaggaaaaggagcgtagaagggaggaggaaaaggccaaaaaggaaaaagagagggagaag
gagaagagaaaagacagagagagaagagagagagagaaagagaaggatgacaaggagaaa
gacaaagatagagagcgtgagaaagaaaaagacaaggtgaaagaacactcgaaaaaggat
gaagtagaaagtgagaatatggatgttacagaaagtcatagtcacagagatgacaagagg
agggacaaggacaaggagaggaaacataggaagcggcatcagagtgatgacgtgagttcc
gataaggatgacaaagaagagtcgaagaagtcccgtcgtcatggcagtgaccgtaaaaag
tcaagaaagcacgcatattcacctgaatcagatagcgagagtaggtacaaaagacacaaa
agagaacacagggatggatcttctcataatggtggtcacgaggagcttgaagatggtgaa
cttggcgaggatggggagatccagtaa
DBGET
integrated database retrieval system
