Olea europaea var. sylvestris (wild olive): 111399141
Help
Entry
111399141 CDS
T05244
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04120
Ubiquitin mediated proteolysis
oeu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111399141
04120 Ubiquitin mediated proteolysis
111399141
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111399141
Enzymes [BR:
oeu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111399141
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111399141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
FlxA
zf-RING_16
zf-RING_5
zf-RING_11
zf_RING_Vps8
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
111399141
NCBI-ProteinID:
XP_022882149
LinkDB
All DBs
Position
8:complement(20316728..20323107)
Genome browser
AA seq
512 aa
AA seq
DB search
MMRLKTYAGLSLIATLAVIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCILWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLTMVTTLLLIKALHWLA
QKRVEYIETTPSVPKLSHIRIVSFIGFLLLIDSLFLYKSVIYLIETRKPSVSLFFAFEYM
ILATTTVSTFVKYVFYVSDMLMDGQWEKKAVYTFYLELVRDLLHLTMYMCFFLVIFMNYG
VPLHLIRELYETFRNFKIRVADYIRYRKIASNMNDRFPDATPDELDASDATCIICREEMT
TAKKLICGHLFHVHCLRSWLERQNTCPTCRALVVPPENGTSVTGSSTDVHQQGTSAASTS
HGSVGANANITQHQARLQAAASAASIYEKSFVYPSPNTLIWSPGYALPPQTLTHQGSMFM
ANSAGQLPEGNVQYGAGLGSNFSAPNSQLDAQRKLIEHQIEFLQHQLKLLQKSAAKRTED
AGIPDFKGKEVLSSSSAIPDCSVNNMSESIDI
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggcttaaaacttatgcggggcttagcttaatagctacactggcagttatctat
catgcctttagtagtagaggtcaattctatccagcaatggtttatttatcgacttctaag
atcagtctggtgcttcttttgaatatgggtctggttattatgtgcattttgtggcaatta
acgaagaaaatcttccttggatcgctgcgagaagcagaagttgaaaggctgaatgagcag
tcatggagggaagttatggaaatactgtttgcaatcaccattttccgacaggacttctca
gttacatttctcacgatggttaccactctactcttgatcaaggctttgcattggttggct
cagaaaagggttgaatacattgaaacaactccttcagttcctaagctttctcacatccgc
atcgtctctttcataggatttctcctcctcatcgacagtctctttctgtacaagtctgta
atatatttgatagaaaccagaaaaccttcagtttcgctcttctttgcatttgaatacatg
atactggcgacgacaactgtgtcgacgtttgtgaaatatgtattttatgttagtgacatg
cttatggatggacaatgggaaaagaaagctgtctacactttttacttggagcttgttcgg
gacttactacacttgactatgtacatgtgtttcttccttgtgatttttatgaactacggt
gtgcctcttcacttgatccgggagctttatgagacattccgtaacttcaaaattcgtgtg
gctgattacatacgttatcggaagatcgcatcaaatatgaatgatcgatttccagatgca
acacctgatgagcttgatgcaagtgatgcaacctgcatcatatgtcgtgaggagatgaca
acagctaagaaacttatttgcgggcatctttttcatgtgcactgcctgaggtcgtggtta
gaaagacaaaacacgtgtcctacttgcagagcccttgttgtaccacctgaaaatggcact
tctgtgactggatcgagtacagatgttcatcaacaaggtacaagtgcagccagtacatct
catggctcagttggtgcaaatgctaatatcactcagcatcaggctagactccaagccgct
gcttctgctgcctcaatatatgagaagtcttttgtttatccttctccaaatactcttatc
tggtcgccgggatatgctttacctcctcaaaccttaacacatcagggctctatgtttatg
gcaaattcagctggacagcttcctgaagggaatgtgcagtatggtgcagggttgggaagc
aattttagcgcaccaaattcacaactggatgcacagaggaaactgatcgagcaccagatt
gagtttctacaacaccagctgaagctcctacaaaagtcagctgccaagaggaccgaggat
gctgggatacctgacttcaagggaaaggaagttttatcatcatcttcagctattcctgat
tgtagtgtgaataacatgtccgaaagtatagatatatag
DBGET
integrated database retrieval system
