Olea europaea var. sylvestris (wild olive): 111399497
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Entry
111399497 CDS
T05244
Name
(RefSeq) uncharacterized protein LOC111399497 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111399497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111399497
03041 Spliceosome [BR:
oeu03041
]
111399497
03036 Chromosome and associated proteins [BR:
oeu03036
]
111399497
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111399497
Spliceosome [BR:
oeu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111399497
Complex B
111399497
Complex C
U2 SnRNP specific factors
111399497
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111399497
TFTC complex
111399497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
111399497
NCBI-ProteinID:
XP_022882617
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All DBs
Position
9:complement(5624038..5642684)
Genome browser
AA seq
1253 aa
AA seq
DB search
MAVLEEESSSSSKPGVVNHGNNKSQSSSNSNSAACYLAKTVLTSSVVLQVVRGHFRSSSS
SDVIFGKETSIEMVIIDNDGIVQSISEQPVFGIIKDLAVLPWNKRFQAQSPKLLGKDILV
VLSDSGKLSFLSFCNEMHRFFPLTHFQLSSPGNSRYQLGRMLAVDSSGCYVAASAYEDRL
AIFSISMSASGDIIDKRIFCPPENEGSLTTASGFTNISGTIWSMCFISKDCHQLSEEHNP
VLAILLNRRGSFYRNELLLLEWNIVKQAVHVIYQFAEAGPLAHHIVEVPNSHGCAFLFRA
GDALLMDFRDVRNPCCVYKTSLNFTPPLAEELSFVEDTIGIPDIMDEEGIYSVAASALLE
LSDMNKNDDPMNIDDYSTKPGSNYVCSWSWEPGNLTNPRMIFSADTGELYMIQVFLESDD
LRVNLSDCLYKGPPSKALLWVEGGFLAAVVDMADGMVLKLEDGLLQYRGPIQSVAPILDI
SVVDHPDENHDQIFACSGMAPEGTLRVIRNGISVEKLLKTSPIYHCVTGTWTVKMKVSDP
YHSFLVLSFVEETRVLSVGLSFTDVTDSVGFQPDVCTLACGLVADGVMIQIHQCGIRLCV
PVRAVHPEGVPLSSPVCTSWFPDNMTLSLGAVGCNLIVVATSSPYLLFVLGVRSLSAYHY
EIYQMQCIRLQNELSCISIPQKCPKHSLMNYADNKPVAVPTEINIDNIFVIGTHKPSVEV
ISFVPDKGLKVLATGIISLTNTVGTAISGCIPQDVRLVLVDRLYVLSGLRNGMLLRFEWP
VESAVSSTKLPSHQNFVDSCLVNSHASLKPMSPNYGIPLIFTSNSSGMAKGDFPVSLELI
AVRRIGITPVFLVPLSDSLDADMIALSDRPWLLQTARHSLSYTSISFQPSTHLTPVSSIE
CPRGVLFVAENSLHLVEMVPSKRLNVQKFPLGGTPRKVLYHSESRLLIVMRTELDNECSS
DVCCIDPLSGSVLSSFKFEPGEIGKCMELVKVGDECVLVIGTSQSAGPAIMPSGEAESTK
GRLLVLCLEHMRNSESSAIMLYSKAGSSSQWSSPFCDVGGYAAEQLSSSSVCSSPDDNSS
DGIKLEETESWHLRLAYSTIWPGMVLALCPYLGRYFLASAGNSFYVCGFSNDNSHRVRRL
AVGRTRFMIMTLTAYFTRIAVGDCRDGVLFYSYHEDARKLEQVYCDPVQRLVADCVLMDV
NTAVVSDRKGSIAVLSCANYLEDNASPERNLTLSCSYYMGDIAMRIKKVIKIL
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcagttttggaggaagaatcttcatcatcatcgaaaccaggggtggttaatcacggt
aataacaaatcacaatcatcctcaaacagtaactccgctgcttgttatttggccaaaaca
gtcctcacgagcagcgtcgttcttcaagtcgtccgcggccacttccgctcctcttcgtcc
tccgatgtcattttcggaaaggagacatccatagagatggtgataattgacaatgatggg
attgttcaatctatttctgagcaacctgtgtttggcattataaaagatcttgctgttctc
ccgtggaacaagaggtttcaagcacaaagtccaaagttgctggggaaggatatattggta
gtcctttctgattcagggaagctatcatttctctccttttgcaacgaaatgcacaggttt
ttcccattgacacactttcaactttcctctcctggaaactcaagatatcaacttggaagg
atgttagctgttgattccagtggctgttatgttgctgctagtgcatatgaagacaggttg
gctattttctcgatctcaatgtctgccagtggcgatatcattgataagaggatcttttgt
cctcctgaaaatgaaggcagcttgacaactgctagtggttttactaatatttctggtacc
atatggagcatgtgcttcatctcaaaagattgccatcaattaagtgaagagcacaaccct
gtgttagccattcttttgaataggaggggatctttttaccggaatgagcttttgttattg
gaatggaatattgtcaaacaagccgtccatgtaatatatcagtttgctgaagctggaccc
ctagctcatcatatagttgaagtccctaattctcatggatgtgccttcctgttcagggct
ggcgatgctctcttaatggattttagggatgttcgtaacccttgttgtgtttataaaaca
agcttgaattttacacctcctttagcggaggaactgagttttgtagaggacactattgga
atacctgatattatggatgaagaaggaatctatagtgttgctgcctcagccttgttggag
cttagtgacatgaataaaaatgatgatcccatgaacattgatgattatagcacaaaacca
ggttccaattatgtctgctcgtggagttgggagcctggtaacttaactaaccctaggatg
atttttagtgcagatactggagaactctacatgattcaagtttttttggagtctgatgac
cttagagtaaacctatctgattgtctttacaaaggcccaccatctaaagccctgttatgg
gttgagggtgggtttttggcagcagttgttgacatggctgatggaatggtcttaaaattg
gaggatggattactacagtacagaggtccaattcaaagcgttgcaccaatcttggatatt
tcagttgttgatcaccctgatgaaaaccatgatcaaatatttgcttgctctgggatggca
cccgaggggacgttacgagtcattcgaaatggtatcagtgtggagaagttattgaaaact
agtcctatttatcattgtgtaactggtacttggacagttaaaatgaaagtttctgatcct
tatcattcttttcttgtgctatcatttgttgaagagacgagagtactttccgttggtcta
agcttcactgatgtgactgattcagttggttttcagcccgatgtctgtactttggcatgc
ggtctcgtggctgatggtgtgatgatccagattcaccaatgtggaattagactctgcgtg
cctgttagagctgtgcatccagaaggtgttcctttgtcatctccagtatgcacgtcatgg
ttccctgataatatgactctaagtcttggagcggttggatgcaatttgattgttgtagcc
acttccagtccgtacttattatttgttcttggtgttagatctttatcagcttatcattat
gaaatatatcagatgcagtgcataagattgcaaaatgagttgtcttgtatttccatacct
caaaagtgcccgaagcactctctgatgaattatgcagataacaagcctgtggccgtacca
actgaaattaacatcgataatatattcgttattggtacccataagccttcagtagaagtc
atatcctttgtacctgataagggcctgaaagttcttgctacgggaatcatttcattaacc
aacactgtgggaactgctattagtggctgtattcctcaagacgtgaggcttgtcttagtt
gatcggctgtatgttctttctggattaaggaacgggatgctacttaggttcgagtggcct
gttgaatctgcagtttcctctacaaagttacccagtcatcaaaattttgttgattcgtgc
ttggtaaattcccatgcctcgttgaaacccatgtctccaaactacggaatcccactaatt
tttacatccaattcatctgggatggctaagggagactttccagttagtcttgagcttatt
gcagtgcgccgtatcggtatcacacctgttttcttggttccattgagtgattcccttgat
gctgatatgattgctctcagtgatagaccttggttattgcagactgctaggcacagtcta
tcctatacatcaatttcctttcaaccttccactcatctcactcctgtgtcctcaattgaa
tgccccagaggagttctatttgttgcagagaacagtcttcatttggtggaaatggtgcca
agtaagaggctcaatgtgcaaaagtttcctcttggtggcactccaaggaaagttttatat
catagtgaaagcaggttgttgattgtcatgaggactgaattagacaatgaatgttcatcc
gatgtttgttgtatagatcctttgagtgggtcagtgttgtcatctttcaaatttgaacct
ggagagattggaaaatgcatggagttagtaaaggttggagatgaatgtgttttggtgatt
ggaactagccaatcagctggtccagctataatgcccagtggagaagctgagagcacgaaa
ggccgtttgctggttctttgccttgaacatatgcgaaattcagagagcagtgccatcatg
ctgtattcaaaggctggttcatcttcacaatggagttcacctttttgtgacgttggtggt
tatgcagccgaacaactctctagcagtagtgtctgcagcagcccagatgataatagctct
gatgggatcaagcttgaagaaactgaatcatggcacttgcgattggcttattcaaccatc
tggccagggatggttcttgctctctgtccttaccttggtcgttatttcctggcctctgct
ggtaactctttttatgtttgcggtttttcaaatgataactcccatcgcgtgagaagatta
gctgttggaagaacacgtttcatgatcatgaccttgactgcatatttcaccaggatagct
gttggtgattgccgtgatggtgttcttttctattcatatcatgaggatgccagaaaactg
gagcaagtttattgtgatcctgtccagaggctagttgctgattgtgttcttatggatgtt
aatactgccgttgtttcagatcggaaggggagtattgctgtcttgtcatgtgccaattat
ttagaagataatgcaagtccggagagaaatttgacattgagttgttcatattatatggga
gacattgccatgcgcataaagaaggtaattaagatcttataa
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