Olea europaea var. sylvestris (wild olive): 111399811
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Entry
111399811 CDS
T05244
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu00040
Pentose and glucuronate interconversions
oeu01100
Metabolic pathways
Module
oeu_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
111399811
Enzymes [BR:
oeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
111399811
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
MRF_C2
Motif
Other DBs
NCBI-GeneID:
111399811
NCBI-ProteinID:
XP_022883074
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Position
9:complement(2189265..2192506)
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AA seq
379 aa
AA seq
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IDYGTRSEGVTDDSQAFLKAWNAACSSAVEHPRVIIPQKTFFVNPIKFRGPCKATKITFT
ILGTIIAPNWPIAWDGLDSSQWLAFDNVNGLNVDGFGTIDGQGKGWWDQSCRYHSQLEQC
TTLAPTALKFLSCNGSSLSNTNFINSPQTHVLIKGCNEFEVNNVVIESPRNSPNTDGIHI
HSSHNLQITNSKIGSGDDCISIGDYVSNVEISNIMCGPGHGISIGSLGRGGTYVKVEKIH
ISNAQFEGTTNGARIKTWQIGKGYVRNVTFENLIFMSVKNPIIIDQNYCVPRGSCKQRET
GVRISDVTYKNMYGTSSTKIAINLNCSQSVPCSGIFMQSIQLESAHAGKQVAANCNSAFG
EEENVFPGPCLSKSKPLIN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atcgattatggcactagaagtgaaggtgttacagacgattctcaagcatttttgaaggca
tggaatgctgcatgtagttcagcagttgagcatccaagggtgataatccctcaaaaaacc
tttttcgtaaatccaatcaagtttcgcggtccatgcaaggcgacgaaaatcacttttaca
attttgggcacgattatcgccccaaactggcctatcgcgtgggatgggctcgactcaagt
caatggctagcattcgacaatgtgaatggtctaaatgttgatggatttggcacaattgat
ggacaaggcaagggatggtgggatcagtcttgtagatatcattcacaactggaacagtgc
acaacattggctccaacagctttaaagtttctttcgtgcaatgggagcagtttgagtaac
acgaacttcattaacagccctcagacgcatgtactcattaagggatgcaatgagttcgag
gttaacaacgtcgtaatagagtctccgagaaatagccctaatactgatggaatccatatt
cactcgtctcacaatttacaaatcaccaattcaaaaattggaagcggtgatgattgcatt
tctattggtgattacgtttcaaacgttgaaataagtaatattatgtgtggacctggtcat
ggtattagtattggaagcctaggaagaggagggacttatgtcaaggtggagaagattcac
ataagtaacgcccaattcgaaggaactacaaatggagcacgaatcaaaacttggcagatt
ggaaaaggatacgttcgaaatgtgacctttgagaatcttatattcatgtccgtgaagaat
cctataatcatcgaccagaattactgtgttccccgaggatcatgcaaacaacgggaaact
ggagttcgaataagtgatgtaacttacaagaatatgtatggaacatcgagcacaaagata
gccattaatttaaattgcagtcagtcagtgccatgttctggaatatttatgcagtcaata
cagttagaatctgcccacgctgggaaacaagtcgcagcaaactgcaatagcgcttttggt
gaagaagagaacgttttcccaggtccttgtctgtcaaaaagcaagcctttgatcaattga
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