Olea europaea var. sylvestris (wild olive): 111400326
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Entry
111400326 CDS
T05244
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111400326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111400326
03036 Chromosome and associated proteins [BR:
oeu03036
]
111400326
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111400326
Coactivators
SAGA/TFTC/STAGA complex
111400326
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111400326
STAGA complex
111400326
TFTC complex
111400326
SAGA complex
111400326
SLIK complex
111400326
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
TFIID_NTD2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
DSE1_N
Beta-prop_RIG_2nd
PAC11
Beta-prop_EIPR1
Beta-prop_WDR75_1st
ASA1
Beta-prop_SCAP
Beta-prop_NOL10_N
CFAP251_N
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
LisH_PAC1
RAB3GAP2_N
Beta-prop_NUP159_NUP214
Cytochrom_D1
Beta-prop_ACSF4
WD_LRWD1
PALB2_WD40
LisH
Motif
Other DBs
NCBI-GeneID:
111400326
NCBI-ProteinID:
XP_022883531
LinkDB
All DBs
Position
1:246852..259219
Genome browser
AA seq
832 aa
AA seq
DB search
MDEEEIEKAVLAYLKKKGFKQTELALQEEQQLRNKNSSPSTNPEIAKHILALSDAENVPA
QYQEGYSKLRSWAHKSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARAFFNSFREEHE
MMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVSIKICQMIEPNYKLDELTKSFNLACLA
MELFLKELLILYFSWTIIVSHSGNGRIIILMTRSFRVIKPFKLLQLLEDSLGERLETTGG
RTMDSDKADGEVKDGELEENKKRSVDGGKGSSTQKKLKKDKVVAATGKASRSESSIATGA
PRVKPELTLPIIPAEVEHSILEDLRNRVQLSSMTLPSISFYTFINTHNGLNCASISHGGS
LVAGGFSDSSLKVWDTAKLGQQTGNSSLQGENELAPNDNILNANAKGRSYTLFRGHSGPV
YSTTFSPFGDFLLSSSSDSTIRLWSTKLNSNLVCYKGHNYPVWDVQYTVNFFFSFRPAEV
EHSILEDLRNRVQLSSMTLPSISFYTFINTHNGLNCASISHGGSLVAGGFSDSSLKVWDT
AKLGQETGNSSLQGENELAPNDNILNANAKGRSYTLFRGHSGPVYSTTFSPFGDFLLSSS
SDSTIRLWSTKLNSNLVCYKGHNYPVWDVQFSPLGHYFASASHDRTARIWSMDRIQPLRI
MAGHLSDVDCVQWHANCNYVATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGR
YMASGDEDGKIMMWDLASGRCVSPLVGHSSCVWSLSFSCEGSLLASGSADSTVKIWDVTR
SSKVSKSEEHKNGNTNRLRSLKTLPTKSTPVYALQFSRRNLLFAAGALTKIA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagaaatcgagaaagcggtgttagcttacctgaagaagaagggttttaag
caaacggaattggccttacaagaagagcagcaactgcgcaacaaaaacagctctccttcc
accaatcctgagattgccaaacatatcctcgcattatccgatgcagaaaatgttcctgct
cagtaccaagaaggatatagcaaacttaggtcatgggcccataaatcattggatctctac
aagcacgagttgcttcatgtgttgtacccagtatttatccattgtttcatggatctcgtt
gcaaaaggtcatattcaggaagctcgagcttttttcaatagcttcagggaagagcatgag
atgatgcatttacgtgacctccaaaaattagaaggcgttctttcaccctcacatctggag
gaaatggaatttgctcattctctaagacagagcaaagtgagcattaagatttgtcagatg
atcgagccaaactacaaactggatgagctcactaaaagttttaacttggcttgcttggct
atggagttgttcttaaaggagcttctgatactttacttttcatggacaattattgttagt
cattcaggaaatgggaggatcattatattgatgactcgctcatttagagttataaaacca
tttaaattgttacagttgcttgaagattccttgggagaaaggttggagacgacaggaggc
cggactatggattcagataaagctgatggagaagtgaaagatggggaattggaagaaaat
aagaaaagatcagttgatggtggaaaaggaagctccacgcagaaaaagttgaaaaaggac
aaggttgttgctgcaacaggaaaagcttctcgatcagaaagcagcattgcaactggagca
ccacgtgtaaaaccagagttgaccttgccaataatacctgcagaggtggaacattctatt
cttgaggatttgaggaatcgtgtgcagttgagtagtatgacattgccttctattagcttc
tacacctttatcaatacacataatgggttaaactgtgcatcgatatctcatggtgggtca
ctggttgctggtggattttcagactcatcattaaaggtatgggacacggcaaagcttggg
cagcaaactggcaattcttctctgcagggagaaaatgagttggctcctaatgacaatata
cttaatgcaaatgcaaagggaagatcttatacattatttcggggtcactctggacctgtt
tattccaccacttttagtccatttggagattttcttctctcttcttcatcagattcaact
attcgattatggagcacaaaactgaattcaaatcttgtttgctacaagggtcataactac
cctgtgtgggacgttcagtatactgtgaatttctttttctctttcagacctgcagaggtg
gaacattctattcttgaggatttgaggaatcgtgtgcagttgagtagtatgacattgcct
tctattagcttctacacctttatcaatacacataatgggttaaactgtgcatcgatatct
catggtgggtcactggttgctggtggattttcagactcatcattaaaggtatgggacacg
gcaaagcttgggcaggaaactggcaattcttctctgcagggagaaaatgagttggctcct
aatgacaatatacttaatgcaaatgcaaagggaagatcttatacattatttcggggtcac
tctggacctgtttattccaccacttttagtccatttggagattttcttctctcttcttca
tcagattcaactattcgattatggagcacaaaactgaattcaaatcttgtttgctacaag
ggtcataactaccctgtgtgggacgttcagtttagtccactaggacactattttgcaagt
gcttcacacgatcgaacggcaaggatctggtctatggacagaatacagcctttaagaatt
atggcaggtcacttgtctgatgtagattgtgtgcaatggcatgcaaactgcaattatgtt
gcaactggatccagtgacaaaaccgtgcgcttgtgggatgttcaaagtggggaatgcgtt
agaattttcattggtcatagaagtatgatcctatccttggcaatgtcacctgatggtcgt
tacatggcatctggtgacgaagatggtaagatcatgatgtgggatcttgcaagtggacgt
tgtgtttcccctttggtcggtcactcctcctgcgtatggtctctttctttcagttgtgaa
ggttcacttcttgcatcgggttctgctgatagcactgtgaaaatatgggatgtaaccagg
agctcaaaggtgtcaaaatctgaagaacacaaaaatggaaacacgaacagactcagatcc
ttgaagaccttacctaccaaatctactccagtctacgctttgcagttctctcgaaggaat
ctactctttgcggctggggctctcaccaaaattgcatga
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