Olea europaea var. sylvestris (wild olive): 111400326
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Entry
111400326 CDS
T05244
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111400326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111400326
03036 Chromosome and associated proteins [BR:
oeu03036
]
111400326
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111400326
Coactivators
SAGA/TFTC/STAGA complex
111400326
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
111400326
STAGA complex
111400326
TFTC complex
111400326
SAGA complex
111400326
SLIK complex
111400326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
TFIID_NTD2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
LisH_PAC1
RAB3GAP2_N
Cytochrom_D1
WD_LRWD1
PALB2_WD40
LisH
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
111400326
NCBI-ProteinID:
XP_022883531
LinkDB
All DBs
Position
1:246852..259219
Genome browser
AA seq
832 aa
AA seq
DB search
MDEEEIEKAVLAYLKKKGFKQTELALQEEQQLRNKNSSPSTNPEIAKHILALSDAENVPA
QYQEGYSKLRSWAHKSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARAFFNSFREEHE
MMHLRDLQKLEGVLSPSHLEEMEFAHSLRQSKVSIKICQMIEPNYKLDELTKSFNLACLA
MELFLKELLILYFSWTIIVSHSGNGRIIILMTRSFRVIKPFKLLQLLEDSLGERLETTGG
RTMDSDKADGEVKDGELEENKKRSVDGGKGSSTQKKLKKDKVVAATGKASRSESSIATGA
PRVKPELTLPIIPAEVEHSILEDLRNRVQLSSMTLPSISFYTFINTHNGLNCASISHGGS
LVAGGFSDSSLKVWDTAKLGQQTGNSSLQGENELAPNDNILNANAKGRSYTLFRGHSGPV
YSTTFSPFGDFLLSSSSDSTIRLWSTKLNSNLVCYKGHNYPVWDVQYTVNFFFSFRPAEV
EHSILEDLRNRVQLSSMTLPSISFYTFINTHNGLNCASISHGGSLVAGGFSDSSLKVWDT
AKLGQETGNSSLQGENELAPNDNILNANAKGRSYTLFRGHSGPVYSTTFSPFGDFLLSSS
SDSTIRLWSTKLNSNLVCYKGHNYPVWDVQFSPLGHYFASASHDRTARIWSMDRIQPLRI
MAGHLSDVDCVQWHANCNYVATGSSDKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGR
YMASGDEDGKIMMWDLASGRCVSPLVGHSSCVWSLSFSCEGSLLASGSADSTVKIWDVTR
SSKVSKSEEHKNGNTNRLRSLKTLPTKSTPVYALQFSRRNLLFAAGALTKIA
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagaaatcgagaaagcggtgttagcttacctgaagaagaagggttttaag
caaacggaattggccttacaagaagagcagcaactgcgcaacaaaaacagctctccttcc
accaatcctgagattgccaaacatatcctcgcattatccgatgcagaaaatgttcctgct
cagtaccaagaaggatatagcaaacttaggtcatgggcccataaatcattggatctctac
aagcacgagttgcttcatgtgttgtacccagtatttatccattgtttcatggatctcgtt
gcaaaaggtcatattcaggaagctcgagcttttttcaatagcttcagggaagagcatgag
atgatgcatttacgtgacctccaaaaattagaaggcgttctttcaccctcacatctggag
gaaatggaatttgctcattctctaagacagagcaaagtgagcattaagatttgtcagatg
atcgagccaaactacaaactggatgagctcactaaaagttttaacttggcttgcttggct
atggagttgttcttaaaggagcttctgatactttacttttcatggacaattattgttagt
cattcaggaaatgggaggatcattatattgatgactcgctcatttagagttataaaacca
tttaaattgttacagttgcttgaagattccttgggagaaaggttggagacgacaggaggc
cggactatggattcagataaagctgatggagaagtgaaagatggggaattggaagaaaat
aagaaaagatcagttgatggtggaaaaggaagctccacgcagaaaaagttgaaaaaggac
aaggttgttgctgcaacaggaaaagcttctcgatcagaaagcagcattgcaactggagca
ccacgtgtaaaaccagagttgaccttgccaataatacctgcagaggtggaacattctatt
cttgaggatttgaggaatcgtgtgcagttgagtagtatgacattgccttctattagcttc
tacacctttatcaatacacataatgggttaaactgtgcatcgatatctcatggtgggtca
ctggttgctggtggattttcagactcatcattaaaggtatgggacacggcaaagcttggg
cagcaaactggcaattcttctctgcagggagaaaatgagttggctcctaatgacaatata
cttaatgcaaatgcaaagggaagatcttatacattatttcggggtcactctggacctgtt
tattccaccacttttagtccatttggagattttcttctctcttcttcatcagattcaact
attcgattatggagcacaaaactgaattcaaatcttgtttgctacaagggtcataactac
cctgtgtgggacgttcagtatactgtgaatttctttttctctttcagacctgcagaggtg
gaacattctattcttgaggatttgaggaatcgtgtgcagttgagtagtatgacattgcct
tctattagcttctacacctttatcaatacacataatgggttaaactgtgcatcgatatct
catggtgggtcactggttgctggtggattttcagactcatcattaaaggtatgggacacg
gcaaagcttgggcaggaaactggcaattcttctctgcagggagaaaatgagttggctcct
aatgacaatatacttaatgcaaatgcaaagggaagatcttatacattatttcggggtcac
tctggacctgtttattccaccacttttagtccatttggagattttcttctctcttcttca
tcagattcaactattcgattatggagcacaaaactgaattcaaatcttgtttgctacaag
ggtcataactaccctgtgtgggacgttcagtttagtccactaggacactattttgcaagt
gcttcacacgatcgaacggcaaggatctggtctatggacagaatacagcctttaagaatt
atggcaggtcacttgtctgatgtagattgtgtgcaatggcatgcaaactgcaattatgtt
gcaactggatccagtgacaaaaccgtgcgcttgtgggatgttcaaagtggggaatgcgtt
agaattttcattggtcatagaagtatgatcctatccttggcaatgtcacctgatggtcgt
tacatggcatctggtgacgaagatggtaagatcatgatgtgggatcttgcaagtggacgt
tgtgtttcccctttggtcggtcactcctcctgcgtatggtctctttctttcagttgtgaa
ggttcacttcttgcatcgggttctgctgatagcactgtgaaaatatgggatgtaaccagg
agctcaaaggtgtcaaaatctgaagaacacaaaaatggaaacacgaacagactcagatcc
ttgaagaccttacctaccaaatctactccagtctacgctttgcagttctctcgaaggaat
ctactctttgcggctggggctctcaccaaaattgcatga
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integrated database retrieval system
