Olea europaea var. sylvestris (wild olive): 111401040
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Entry
111401040 CDS
T05244
Name
(RefSeq) ubiquitin receptor RAD23d-like
KO
K10839
UV excision repair protein RAD23
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420
Nucleotide excision repair
oeu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111401040
09124 Replication and repair
03420 Nucleotide excision repair
111401040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oeu03051
]
111401040
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111401040
Proteasome [BR:
oeu03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111401040
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111401040
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_Ucp12
Rad60-SLD_2
TECR_N
Dsc3_N
UBA_RAD5A
Ubiquitin_2
UBA_3
Motif
Other DBs
NCBI-GeneID:
111401040
NCBI-ProteinID:
XP_022884340
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Position
10:complement(6764041..6769411)
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AA seq
381 aa
AA seq
DB search
MKIFVKTLKGTHFEIELKPEDTVADVKKKIETVQGSDVYPASQQMLIHQGKVLKDETTLE
ENKVAEKSFVVIMLSKNKASSSGAATASTASLSRNQPARNTPPPAQSVTASPTPASTLAP
PQSAPESVPAPAPAAASSETDVYDQAASNLVAGSNLEATVQQILDMGGGSWDRGTVIRAL
RAAYNNPERAVEYLYSGIPEQAEVPPPVAQPPAGVQPVNPSIQATEPVVPSSGPNVNPLD
LFPQGMPNVGSNATGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQE
HQADFLRLINEPVEGEGNIEGQLTDAMPQTVTVTPEEREAIERLEAMGFDRALVLEVFFA
CNKNEELAANYLLDHMHEFDE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagacacttaagggcacccacttcgagatcgaattgaaaccggaa
gacaccgtggcagatgtgaaaaagaaaatagaaacggttcagggatcagatgtctaccct
gcttctcagcaaatgctcatccatcaggggaaagttctcaaggatgagacgacacttgag
gagaacaaagtagctgaaaaaagtttcgttgtcatcatgttaagcaagaacaaggcttca
tcaagtggggctgcaactgcatcaactgcatctttgagtaggaaccaaccggcaagaaat
actcctccaccagcacaatctgtaacagcatccccgactcctgcatcaactttggcacct
ccacaatctgcccctgaatctgttcctgcccctgcccctgccgcagcttcctcagagacg
gatgtttacgatcaagcagcatcaaatcttgttgctggaagtaacttagaggccactgtt
cagcaaattcttgatatgggtggaggtagttgggatcgaggtactgttatacgagcttta
cgtgctgcatataacaatccagagagagctgttgaatacctctattctggtattcctgag
caagcagaagttcctcctcctgttgctcaacctcctgcaggtgtgcagcctgtgaatcct
tcaatccaggcaacagagccagtggtgccttcgagtggacccaatgtcaatcctttagac
ctttttccacagggcatgccaaatgtgggttcaaatgcgactggtaacttggattttctt
cgcaatagtcaacagtttcaagctctgcgggccatggtgcaagccaatcctcaaatcttg
cagcctatgcttcaagagctggggaagcaaaacccacaattagtgaggttgattcaagaa
catcaggctgactttctacgcctaataaatgaacctgttgaaggggaggggaacatagaa
gggcaacttaccgatgcaatgccgcagactgtgactgtcacacctgaagagcgggaagca
attgaacgtcttgaagctatgggttttgatcgagctttggtgttggaagtatttttcgct
tgcaacaagaacgaggagctggctgcaaactatctattagatcatatgcacgagtttgac
gagtaa
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