Olea europaea var. sylvestris (wild olive): 111401212
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Entry
111401212 CDS
T05244
Name
(RefSeq) DNA repair protein RAD4 isoform X1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
111401212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111401212
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111401212
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
111401212
NCBI-ProteinID:
XP_022884610
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Position
10:11210024..11224765
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AA seq
990 aa
AA seq
DB search
MRTRNQSRRLHQSTGEQESTKHHRESENINDNETLANVSRDAVGKLLKRVKRGFNKEDSS
YLRRCDSVAKPQREQKGNDDKSTGTAAASDTRETESCSRDAIDNIPSEVKVEDGKYSKQE
NEDEIDDPDWEDGSIPASHSTENNQEELINGMTVEFDVSPGSAKQKAVRRATAEEKEVAE
LVHKAHLLCLLGRGRLIDSACNDTLIQASLLSLLPTDLLKMTEIPVLTATCLTPIVRWFH
NNFHVRSPSDAEKSCHLALASALETREGTAEEVAALSVALFRAMNLTTRFVSILDVASMK
PDAYKCSSTNSGVSKGGKGIFNSSTLMVAGPSCLFDSPSKLSSFDDMQKGSQCPVRGSGE
SMAEKSMKHEFQSHGIFVTDKSTDGKSDSFTEAGTAASVPDLMESEGLKRKGDLEFEMQL
KIALSATAIESSKSTMAPSVVDSPSNSSTITPPYKRMKKIMTEGSSSSSNGISTSIGSKK
VGAPLYWAEVFCNGENLTGKWVHVDAVNAIIDGEQKVEAAASACKKSLRYVVAFAGHGAK
DVTRRFQIFDLIFAMLFWYCTKWYKIASQRINSTWWDRVLAPLKELESGATSGVINLEQE
ASVGEEMEALRGADQSGRECLLKTKQLCGESEECSDKAAVSLMKNSVEASRSSLEDMELE
TRALTEPLPTNQQAYKNHHLYAIERWLKKYEIMYPKGPVLGFCSGHPVYPRTCVQTLHTK
ERWLREGLQVKVDELPAKVLKRSLNRSKEQAHVDDEYSEVDPEGTVSLYGKWQTKKLCLP
QAINGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVGLVAKRLDIDYAPAMVGFEFRNGRS
FPVVEGIVVCAEYKDAILEAYAEEEERRMAEEKRRNEALALSRWYQLLSSIITRQRLKNC
YGDGDSSQPSIDIPIPNNKSCIPPSRTNQKNVSPRCHQVNTPDEKHNAPATVPTQNHEHE
FIMDDQTFDEESSLRVKKCWCGFSIQFEEL
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccagaaaccagtccaggagactccatcaatccaccggtgagcaagaatcaact
aaacatcatcgtgaatcagagaacatcaatgataatgaaactcttgcaaatgtatctcga
gatgctgtggggaaactcttgaaaagagttaaaagggggtttaataaagaagatagtagt
tacctacgtcgatgtgattcagtagccaagccacagagagaacagaaagggaatgatgac
aaatctacaggtactgcagcagcaagtgatacgagagaaactgaatcttgtagtagagat
gcaattgataatattccatcagaagtgaaagttgaggacggtaagtattctaagcaagaa
aatgaggatgaaattgatgatcctgattgggaggatggatcaattccagcatcacattcc
acagaaaataatcaagaagaattgatcaatggaatgactgttgagtttgatgtttcacct
ggctctgcaaagcagaaggcagtaagacgggcgactgctgaagagaaggaagtggctgag
cttgtccacaaggctcatttgctttgtctactagggaggggaaggttgattgatagcgct
tgtaatgataccctcattcaggcttctctactttctctcctgcccacggacttgctgaag
atgacagagataccagtacttaccgctacctgtttgactccaattgtccgttggtttcac
aataatttccatgttagaagtccaagtgatgctgagaagtcatgtcatttagcattagca
tctgctttggagactcgagaggggacagcagaagaggttgcagcattatctgtggcacta
tttagggcgatgaatctcacaactcggtttgtctccattttagatgtggcctccatgaag
cccgatgcttacaaatgttcatccacaaatagtggtgtaagcaaggggggtaaaggtata
tttaactcatcaactctgatggtggctggaccaagctgtttgtttgattctccttcgaag
ttatcatcatttgatgacatgcagaagggtagtcaatgtcctgtaagaggttctggtgaa
agcatggcagagaaatcaatgaagcatgaattccagtcccatggtatttttgtcactgac
aagtccacagatggaaaatcagactcgtttactgaggccggaactgctgcttctgttcca
gacctaatggaatctgagggattgaagagaaaaggagatcttgaatttgagatgcagttg
aaaatcgcgctctctgccactgcaattgaaagttctaaaagcaccatggctcccagtgtg
gtggattcacctagcaattcttcaactatcactcccccttataaaagaatgaagaaaatt
atgacagaaggttcttcatcttcgtcaaatggaatatctacgtcaattggatcaaaaaag
gtgggagccccactttattgggccgaagttttctgtaatggagagaacttgacgggaaaa
tgggtgcatgtggatgctgtcaatgctattattgatggagagcagaaagtagaagctgca
gcttctgcatgcaaaaaatctttgagatatgtagttgcttttgctggacatggagctaag
gatgtgacacgcaggtttcaaatttttgatcttatatttgccatgttattctggtattgt
acaaaatggtacaagatagcatcacaacgaatcaattcaacatggtgggatagagtattg
gcaccattgaaggagttggagtcaggagcaactagtggagtcatcaacttagaacaggaa
gcttcagttggtgaggagatggaagcattgcgaggagcagaccaatcaggtcgggagtgc
cttttgaaaactaaacaattatgtggagaatcagaagagtgtagtgacaaggctgcggtg
tctttgatgaagaactctgtagaagcttccagaagctcacttgaagatatggaattggaa
actagagcactgactgaaccacttcctaccaatcaacaagcctacaaaaatcatcacttg
tatgcaattgaaagatggcttaagaagtatgagattatgtatcctaagggacccgtgttg
ggtttttgttctggtcatcctgtgtatcctcgaacttgtgtccaaacacttcatacaaaa
gaaagatggctgcgcgaggggttgcaagtgaaagttgatgaacttcctgctaaggttctg
aagcgctctcttaatcgtagtaaagaacaagctcatgtagatgatgagtattctgaggtc
gatcctgaaggaaccgtttccctctatggaaagtggcagacaaaaaaattgtgccttcct
caagccatcaatgggattgttcctaagaacgaacgtggccgtgtggatgtgtggtctgag
aagtgccttccaccaggcaccgtccacttgcggttgccgagggtgggtcttgtggccaag
aggctggatatcgactatgcacctgctatggttggatttgaattcagaaatggccggtca
ttcccagtagttgagggtattgttgtttgtgctgagtacaaggatgctattctagaggca
tatgcagaagaagaagagagaagaatggcagaagagaaaaggaggaatgaagcactagct
ctttctaggtggtatcaacttctttcttccatcattactcggcaaaggttgaagaactgc
tacggggatggggattcatcacagccctccattgacatcccaattccgaataataaatcc
tgtatacctcccagtcgtaccaaccaaaagaacgtgtctcccagatgccatcaagttaac
acaccagatgaaaaacataatgcccctgcaactgtacctacacaaaatcacgaacatgaa
tttatcatggatgatcagacttttgatgaagagagttcattacgagtgaagaaatgttgg
tgtggattctcaatacagtttgaggagttatag
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