Olea europaea var. sylvestris (wild olive): 111401552
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Entry
111401552 CDS
T05244
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03082
ATP-dependent chromatin remodeling
oeu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111401552
03083 Polycomb repressive complex
111401552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oeu03036
]
111401552
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111401552
Histone modification proteins
HAT complexes
HATB complex
111401552
HDAC complexes
Sin3A-HDAC complex
111401552
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111401552
PRC2.2
111401552
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111401552
Heterochromatin formation proteins
Other heterochromatin formation proteins
111401552
Chromatin remodeling factors
NuRD complex
111401552
NuRF complex
111401552
NuRF complex (fruit fly)
111401552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_DCAF12
eIF2A
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
111401552
NCBI-ProteinID:
XP_022885107
LinkDB
All DBs
Position
10:complement(23260070..23274304)
Genome browser
AA seq
462 aa
AA seq
DB search
MKDRAGGRGSAPTEASVEERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKN
RQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHIAQFNEEARSPFVKKWKTIIHPGEV
NRIRELPQNSKIVATHTDSPDVLIWDVESQPNRHPVLGASASRPDLVLTGHQENAEFALA
MCPTEPFVLSGGKDQSVVLWSIHDHISSLAADQGAAKSPGSKGGAVNGKSSDSPTIQARG
IFQGHTDTVEDVQFCPSSAQEFCSVGDDSCLILWDARTGSAPVVKVEKAHSADLHCVDWN
PNDVNLILTGSADNTVRMFDRRNLTNGGVGSPVHIFEGHSAAVLCVQWSPDRSSVFGSAA
EDGILNVWDYGKIGKLEGAGTGSSDSPPGLFFRHAGHRDKVVDFHWNSSDPWTIVSVSED
GEKTGGGGTLQIWRMMDLLYRPEEEVLAELDKFKSHLLTCAS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacagagcaggaggaagaggatcagcgccaacggaggcttcagtggaggagcgt
tacacacagtggaaatcactggtccctgtgctctacgactggctcgccaatcacaacctc
gtttggccctctctttcttgtcgatggggtccgcaactagaacaagctacttacaagaac
cgacagcggctttacctttctgaacagactgatggtagcgttcctaatacactcgtcatt
gcaaattgcgaagttgtaaaacctagggtggcagcagcagagcacatagcacagtttaac
gaagaagctcgctcgccatttgttaagaagtggaaaaccatcatacaccctggagaggtt
aatcgaatcagagaactaccacagaatagcaagattgtggccactcacactgacagtccg
gatgttctcatttgggacgttgaaagtcagcctaatcgtcaccctgttttaggtgcctca
gcatctcgtccagatctggtactgactggtcaccaagagaatgctgaatttgcacttgcc
atgtgcccaacagaaccttttgtgctatctggagggaaggaccagtcagtagttttgtgg
agcatccatgaccacatctcttctctggcagcagatcagggagctgcgaagtctccagga
tctaagggtggtgcagtcaatggaaaatcttcagacagtcccaccattcaagctcgaggt
attttccaagggcacacggacacagtggaagatgttcagttttgcccttcaagtgcgcag
gagttctgtagcgttggtgatgattcttgccttatcctatgggacgctagaactggctct
gctcctgttgttaaggttgaaaaagctcacagtgctgatcttcactgtgttgattggaat
ccaaatgatgtgaatctgattttgaccggatctgctgataatactgtacgcatgtttgac
cgacgaaatcttactaatggtggagttggatccccagtccacatattcgaaggccacagt
gctgcagtcctgtgtgtccagtggtctccggacaggtcatctgtatttgggagtgctgca
gaggatggtattctgaatgtctgggattacggaaagattggcaagctggagggtgctggt
acaggaagttcagattctcctcctggcctattcttccgacatgctgggcacagggataag
gttgttgacttccactggaattcatcagacccgtggacaattgtcagtgtctctgaagat
ggtgaaaaaacgggcgggggaggtacactacagatatggcgaatgatggacttgctttac
cgtccagaagaggaggttcttgctgagctcgataagttcaaatctcacctactgacgtgt
gcctcttga
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