Olea europaea var. sylvestris (wild olive): 111401795
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Entry
111401795 CDS
T05244
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A-like
KO
K12856
pre-mRNA-processing factor 8
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111401795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111401795
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111401795
Complex C
U5 SnRNP specific factors
111401795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111401795
NCBI-ProteinID:
XP_022885469
LinkDB
All DBs
Position
10:30182388..30195707
Genome browser
AA seq
2367 aa
AA seq
DB search
MYNNGQEMWNHNSNPAPPGTSISGGAGAAPIMAPGTSGVAPPGPPPSITPSYTVLPTEAQ
LDERARKWMQLNSKRYSDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYL
GALKFVPHAVYKLLENMPMPWEQVREVKILYHITGAITFINEIPWVVEPIYLAQWGSMWI
MMRREKRDRRHFKRMRFPPFDDEEPPLDYADNLLDVDPLEPIQLELDEEEDSAVYTWFYD
HKPLVKTKLINGPSYRKWHLSLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALN
MCIPGGPKFEPLYRDMEKGDEDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLS
VYHTPMVMYIKTEDPDLPAFYYDPLIHPITSTNRDQREKKIYEEDDDDFQLPEGVEPLLT
STPIYTDTTAAGISLLFAPRPFNMRSGRMRRAEDIPLVSDWFKEHCPPSYPVKVRVSYQK
LLKCFVLNELHHRPPKAQKKKHLFKSLQATKFFQTTELDWAEAGLQVCKQGYNMLNLLIH
RKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNV
DAFQLADGLQYIFSHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGF
WAPMWRVWLFFLRGIVPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAV
MHDVLDAMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADW
WTNVAHYNRERIRRGATVDKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAI
YTTTVHWLESRKFSPIPFPPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQ
AYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYE
GDKRHLFPNWIKPADSEPPPLLVYKWCQGINNLQDIWDTSEGQCVVMLQTKFEKFFEKID
LTMLNRLLRLVLDHNIADYVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLD
LLLLGLTRASEIAGPPQMPNEFITYHDTRVETRHPIRLYSRYIDKVHILFRFTHEEARDL
IQRYLTEHPDPNNENMVGYNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLE
WENSFVSVYSKDNPNLLFSMCGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVA
FLRVDDEHMKVFENRVRQILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLL
VKCENKIQTRIKIGLNSKMPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSKQTDV
GITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAQAQNRRLTLEDL
EDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLN
NYRTDVIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQ
IPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHES
VVMDLCQVLDQELDALEIETVQKETIHPRKSYKMNSSCADILLFAAHRWPMSKPSLVAES
KDVFDQKASNKYWIDVQLRWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLA
YNLHSAFGNWFPGSKPLLAQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNY
GEIFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWA
GQKRLGQLAKWKTAEEVAALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSE
LQLPFQACLKIEKFGDLILKATEPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNE
KAKMLLKPDKTIVTEPHHIWPSLSDEQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIR
DIILGAEITPPSQQRQQIAEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAYG
SKTDWRVRAISATNLHLRVNHIYVTSEDVKETGYTYIMPKNILKKFICIADLRTQIAGYI
YGISPPDNPQVKEIRCIAMPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQL
SPQDLAAHAQILANNKQWDGEKCIVLTCSFTPGSCSLTAYKLTPSGYEWGKNNTDAGSNP
HGYLPTYYEKVQMLLSDRFLGFYMIPDNGPWNYNFMGVKHTAGMKYGVKLGAPREYYHED
HRPTHFLEFSNLEEAETAEGDREDTFT
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaacggacaggagatgtggaaccacaacagtaatcctgcgccgccgggcacg
agcattagcggcggagcaggagcggcgccgattatggctccggggactagcggagtagct
cctcctggaccaccgccttcaattactccttcgtacactgttcttccgacagaggcgcaa
ctcgacgagcgagcgagaaaatggatgcaacttaactcgaagcggtatagtgataagagg
aagttcgggtttgtggagacgcagaaggaggatatgcctcctgagcatgtacgaaagatc
attcgggatcatggtgacatgtcatcgaagaaatttcgtcacgataagcgtgtctattta
ggagctcttaagtttgttccgcacgctgtttacaagctccttgaaaacatgcccatgccg
tgggaacaggtccgcgaagtgaagatactctaccatattaccggtgctattacatttata
aatgaaataccgtgggttgttgaacccatttatctggctcaatggggttctatgtggatt
atgatgcgaagagagaagagagatcgacgacatttcaaaagaatgcgttttcctcctttt
gatgatgaagaacctccactagattatgctgataatcttctagatgtggatcctttggag
ccaattcaactggagttggacgaggaagaagattcagctgtttatacgtggttctatgac
cataagcctctcgtgaaaacaaagcttatcaatggtcccagctaccggaaatggcatctc
tcacttccaattatggcaacacttcatcggcttgctggacagctgctctctgatttaatt
gatcgcaattacttttacttatttgacatggagtcattttttactgctaaagcactgaac
atgtgtatacctggtggtccaaagtttgaacctttgtatcgtgacatggagaagggagat
gaggactggaatgaatttaatgacattaacaagcttattatccgctcacctctcaggacg
gaatacaggattgcattccctcatctgtataataataggccccggaaagtgaagctcagt
gtatatcacactccaatggtcatgtatatcaaaaccgaggatccagatcttcctgctttc
tattatgatcctctaattcaccccataacaagtaccaatagggaccagagagagaagaaa
atttatgaagaggatgatgatgatttccagttgcctgagggggttgaaccattactaaca
agcactccaatttacacagatactactgctgcgggaatttcacttttgtttgccccacgc
ccgttcaacatgagatctggtcggatgcggcgtgctgaagatataccgctcgtatcagat
tggttcaaggagcactgtcctccttcttatccagtcaaagttcgtgtcagttaccagaaa
ttgctgaaatgttttgtgttgaatgagctgcatcacagaccacctaaggctcaaaagaag
aagcacctgtttaagtctctccaagctacaaagttttttcagactacagaacttgattgg
gctgaagctggtctccaggtttgcaagcaagggtacaatatgctgaatctgttgatccac
aggaagaatctcaactacctccaccttgattataatttcaacttgaagcctgtgaagacc
ctcactactaaggaacgtaaaaaatcacggtttggtaatgcttttcatctttgtcgtgaa
attttgcgtttgacgaagctagtagttgatgcgaatatccagttccggctgggaaatgtc
gatgcatttcagttggccgacggattgcaatatatcttttcacatgttggccagttgacg
ggtatgtaccgttacaagtacaggctcatgcggcagattcgaatgtgtaaagacttgaag
cacttgatttattaccgatttaatactgggccggtggggaaagggcctggatgtggtttc
tgggcccctatgtggagggtgtggttgttttttcttcgtggcatagtacctctcctggaa
aggtggttgggaaatttactcgccagacagtttgaaggacggcattctaaaggagtggcc
aaaactgtgacaaagcagcgtgttgaaagccacttcgacttggagcttcgtgctgctgtt
atgcatgatgttctggatgctatgccagagggtattaagcaaaataaggcgagaactatc
ctgcagcatctgagtgaagcatggcgctgttggaaagcaaatattccgtggaaggtacct
ggtttgcctgttcctattgagaacatgattctgcgatatgtcaagtcaaaagctgattgg
tggacaaatgttgctcattataatcgtgagcgtatcaggagaggagcaacagtggacaag
acagtttgtcgaaagaatcttggacgattgacccgcctttggttgaaggctgagcaggaa
cgccaacacaactacttaaaagatggtccatatgtcactccggaagaagctgtggctata
tatacaaccactgtgcattggttggaatcaagaaaattctctccgattccatttcctcct
ctgtcttacaagcatgatacgaagcttctcatccttgctcttgagaggttaaaggaatct
tatagtgtggctgttaggttaaaccagctacaaagagaagaattgggtcttattgaacag
gcttatgataatccacatgaagctttgtctcgtattaaacgtcatttgcttacgcagcgc
gccttcaaggaagttggcattgagttcatggacctgtacagttatctaataccagtttat
gagattgaacctcttgagaagattactgatgcatatcttgaccagtatctgtggtatgag
ggtgacaaacgccacctcttccccaattggattaagcctgcagattcagagccacctcca
ctgttggtctataaatggtgtcagggcataaacaatttacaagacatttgggacactagt
gaaggacagtgtgttgtgatgcttcagaccaaatttgagaaattttttgaaaagattgat
ctgaccatgcttaacaggcttctgcgtttggttcttgaccataatattgctgattatgtc
actgcaaagaacaacgttgtgttgtcatacaaggacatgagccacacgaactcatatggg
ctcatacgtggtcttcagtttgcttcttttgtagtgcagtactatggactcgtccttgat
cttttactacttggtttgactcgagccagtgaaatcgctggtccaccccagatgccaaat
gagttcattacttatcatgatactagagtagaaacaagacatccaattcgtttatactcc
agatacattgacaaggtgcatatattattccgtttcacccatgaagaggctcgggacctt
atccagcggtatctcactgagcatccagatcctaacaatgaaaatatggttggttataac
aacaaaaaatgctggccaagagatgccaggatgagacttatgaagcatgatgtcaatctt
ggtagaagtgttttctgggatatgaagaatcgtcttcctagaagcattacaactcttgaa
tgggagaacagctttgtatctgtctacagcaaggacaacccaaacttacttttcagcatg
tgtggatttgaagttcgtatactgcctaagattagaatgactcaagaggctttcagcaat
acaagagatggagtttggaatctgcagaatgagcagacaaaagaacgtactgcagttgct
ttcttaagggtagatgatgaacatatgaaggtgtttgagaatcgtgtaagacaaattctc
atgtcctcaggttcgactacattcacaaagattgttaacaaatggaatacagcacttata
ggcctcatgacatatttccgtgaagcaactgttcatacacaagaactgttggatctgctg
gtaaaatgtgaaaataaaatacagacccgtataaagattggattgaactcaaagatgcct
agcaggttccctcctgttatcttttacaccccgaaggaaattggaggacttggaatgttg
tcaatgggtcatatattgattccccagagtgacctccgatatagtaaacaaacagatgtt
ggcataactcattttaggagtggaatgagtcacgaagaggaccagttgattccaaatctg
tatcgttacatacagccatgggagagtgagttcattgattcacaacgggtttgggctgaa
tatgcattgaagcgacaagaagcccaggcacaaaataggcgtttaactctggaagatttg
gaagattcttgggatcgtgggatacctcgaatcaataccttgtttcagaaggaccgccac
actcttgcatatgacaaaggatggagagtacgaacagattttaagcagtatcaagttctg
aaacaaaatccattctggtggacgcaccagaggcatgacgggaagttgtggaacttgaat
aactatcgaactgatgttattcaagcacttgggggagtagaaggaattctcgagcataca
ctgttcaaaggaacatactttcctacttgggaaggtcttttctgggagaaggcttcaggt
ttcgaggagtctatgaagtataagaaattgacaaatgctcagagatctgggctgaatcaa
attcctaatcgaagatttaccctttggtggtcacctactataaatcgagcaaatgtatat
gttggtttccaggtgcagctggatctgaccgggatatttatgcatggaaagatacctaca
ctaaagatatctctgattcagatattccgtgctcacttgtggcagaagattcatgagagt
gtggtcatggatctttgccaggttttggatcaagagctggatgcattggaaattgaaact
gttcagaaagaaacgatccatccaaggaagagttacaaaatgaacagctcgtgtgctgat
attcttctgtttgctgcccatagatggcccatgtcaaagcccagtcttgtggccgagtca
aaggatgtgtttgaccaaaaggcaagcaataaatactggatagacgttcagcttcggtgg
ggtgattatgactcccatgatattgagcgatacactcgggcaaagtttatggattacaca
acagataacatgtctatctatccatcaccaactggggtcatgattggacttgatcttgct
tataacctgcattctgcattcggaaactggttccctgggtcaaaaccactgcttgcccag
gctatgaataagatcatgaagtcgaatccagcattatatgttctgagagaacgtataagg
aaagggctgcagttgtattcttcagaacctacagagccgtatttatcgtcacagaactat
ggggagatattcagcaatcagattatctggtttgttgatgacactaatgtgtaccgtgtc
acaatacacaagacatttgagggaaatctcacaacaaaacccattaatggtgccattttt
atatttaaccctaggacgggccagctttttctaaaggtcattcacacaagtgtctgggct
gggcaaaagcgacttggccagctggcgaagtggaaaacggcagaagaagtggctgcactg
gtgcgatcattgcccgttgaagaacagcctaagcaaatcatagttactcgtaaaggaatg
ttggatcccttagaggtccatttacttgattttccaaatatcgtgatcaagggaagcgaa
ctacagttgcctttccaggcttgcttgaagattgagaaatttggtgatctaatactgaag
gctacagaaccacagatggtcttgttcaatatatatgatgattggttgaagagtatctca
tcctacacagcattctctagacttatcttgatcttgcgtgctcttcatgtgaacaatgag
aaggctaagatgttgctgaagcctgacaagacaattgtcactgagccccatcatatctgg
ccatctctatcagatgaacagtggatgaaggttgaggttgcccttagagatctgatactt
tctgactatgccaagaagaacaatgtcaacacatctgctctgacacagtcagaaattcgt
gatataattcttggggctgagataactccgccatcgcagcagcgacaacaaatagccgag
attgagaaacaggcaaaggaggctagtcagcttacagcagtcactacaaggaccacaaat
gtgcatggtgatgagttgattgttaccaccacaagtccatatgagcaagcagcatatggg
tctaaaactgattggcgtgttagagcaatatctgctacaaatcttcatcttcgtgtgaat
cacatatatgtgacctcagaagacgttaaggaaacgggatacacatacatcatgcctaaa
aatattttgaagaagtttatatgcattgctgatttgcgcactcaaattgctggatacatt
tatggcataagccctccagacaatcctcaagtgaaggagattcgttgtattgccatgcca
ccacagtggggaactcatcaacaggttcatcttccatcagctctacctgaacacgacttt
ctgaatgacttggagcctttaggatggatgcatacacagccaaacgaacttccccagctg
tctccgcaggatttagccgctcatgctcagatcttggcaaacaataaacaatgggatgga
gagaaatgtattgttttgacctgcagttttaccccgggttcatgctctttaactgcatat
aagctgaccccatcaggatatgaatgggggaaaaacaacacagatgctggaagcaatccc
cacggttatctgccaacctactatgagaaagttcagatgcttttgagtgaccgtttcctc
ggtttttacatgatacctgataatggtccttggaactacaatttcatgggagtgaaacac
accgccggcatgaagtatggagtgaaactcggggcgcctcgtgaatactatcatgaagac
cataggccaacacatttcctagagttcagcaatttggaggaagctgaaactgctgaaggg
gaccgagaagatacctttacttga
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integrated database retrieval system
