Olea europaea var. sylvestris (wild olive): 111402110
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Entry
111402110 CDS
T05244
Name
(RefSeq) vacuolar protein-sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111402110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oeu04131
]
111402110
Membrane trafficking [BR:
oeu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
111402110
Hops complex
111402110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS11_N
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_C
Clathrin
Beta-prop_WDR36-Utp21_1st
zf-C3H2C3
TPR_Vps41
zf_RING_Vps8_fungal
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111402110
NCBI-ProteinID:
XP_022885951
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Position
10:complement(37515928..37526388)
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AA seq
953 aa
AA seq
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MYQWRKFDFFEEKKSRIPEEIEGKIECCSSGRGKIVLGCHDGTVSLLDRGFQLLYSFPAH
SSSVLYLQQLKQRNFLVTVGEDEQISAQQSGMCLKVFDLAKMHDEGSSTSSPECVQILRI
FTNQFREAKITSFLVLEEAPPIIFIAIGLDNGCIYCIQGDIARERIKRFKLQVDYAHSDK
DQSPINGLGFRVDGQAFQLFAVTPNSVSLFNLQTQPPRGQTLDQIGSTASSVAMSDRSEL
IIGRSEAVYFYEVDGRGPCWAFEGEKKFIGWFRGYLLCVIADQRTGKNTFNIYDLKNHLI
AYSLAVKEVSHMLCEWGNIVLIMADKSALFIVEKDMESKLDMLFKKNLYSVAINLVQSQQ
ADAAATAEVLRKYGDHLYSKQNYDEAMSQYIHTIGYLEPSFVIQKFLDAQRIYNLTNYLE
KLHEKGLASKDHTTLLLNCYTKLKDVTKLNVFIKSEEQVGEHKFDVETAIRACRAANYHE
QAMYVAKKAGKHEWYLKILLEDLAMYDEALQYINSLEPSQAGVTVKEYGKLLIEHKPRET
IEILISLCTEEGDLVKKGASNSNFLTMLPSPVDFLNIFVHHPQSLMEFLERYTNKVKDSP
AQVEIHNTLLELYLSHDLNFPSLSQNSINENGDLRTDQLSSTATMSESNGKIILDRNDVN
EEKDWQERQRKGLLLLKSAWPSEQEQPLYDVDLAIILCEMNAFKEGLLYLYEKLKLYKEV
IACYMQSHDHEGLIACCKRLGDSGKGGDPSLWSDLLNYFGELGEDCSREVKEILMYIERD
DILPPIIVLQTLSRNPCLSLSVIKDYIARKLEQESKLIEEDRRAIEKYQDETSTMRKEIQ
DLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHQRCLGDNDKECPECAPEYRAVLEKK
RNLEQNSKNQDQFFQQVRNSKNGFSVIAEYFGKGIISKTSNGPAETLNSSSDF
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaatggaggaaattcgacttcttcgaggagaagaaaagcaggattccagaggaa
atagagggaaaaattgagtgctgctccagtggcagaggaaagatagtgttgggttgccat
gacggcaccgtttcgttgctcgatcgcggctttcagctcctctactccttccccgcacac
tcctcctccgtcctttacctccagcagctcaagcaacgcaacttcttagttacagtagga
gaggatgagcaaatatctgcacaacaatcaggcatgtgcttgaaggtttttgaccttgct
aaaatgcacgatgagggctcaagtacgtcaagtccagagtgtgttcaaattttacggata
tttaccaaccaatttcgtgaagcaaagataacatcctttttagttctagaagaagctcca
cctataatatttattgccattggattggacaatggttgtatttattgtatccaaggcgat
attgcacgtgagcgcattaagcgctttaagcttcaggtggattatgctcattcagacaaa
gaccagtctcctattaatggtcttggattccgagtcgatggccaagcatttcaactgttt
gcagtcactccaaattcagttagcttgtttaacttgcagactcaaccacctcgaggtcaa
acccttgatcagattggatctactgcttctagtgtagcaatgagtgatcgctcggaactt
atcattggtcggtctgaagctgtctatttttatgaagttgatggtcgaggtccttgttgg
gcatttgagggagagaaaaaattcattgggtggtttcgtggttaccttttatgtgttatt
gcagatcaaagaactggcaagaatactttcaacatttatgatctgaagaaccatttaatt
gcatacagtctagcagttaaagaagtttctcacatgctttgtgaatggggtaacatagta
cttataatggcagacaaatctgctctttttatcgtagagaaggatatggagagcaagtta
gatatgcttttcaaaaagaacctgtactctgtggccattaatcttgttcagagccagcaa
gctgatgctgctgcaaccgctgaagtgctaaggaaatatggcgatcatttatatagcaag
caaaactatgatgaagctatgtctcagtatatccacaccatcggttatcttgaaccttca
tttgtcatacagaagtttttggatgcacaaagaatctacaaccttacaaattacttggag
aagttacatgaaaaagggcttgcttcaaaagaccataccacacttctgttaaattgttat
accaaattgaaagatgttacaaagctgaatgttttcattaaaagtgaagaacaagtgggg
gaacataaatttgatgttgaaactgcaataagggcatgccgagctgctaattaccatgag
caagcaatgtatgttgccaagaaagccgggaagcatgaatggtacttgaagattttactt
gaggacttagctatgtatgatgaagcattgcaatatataaatagtcttgaacctagtcaa
gctggggtaactgtcaaagaatatggaaaacttcttatagagcacaagccaagggaaaca
attgaaatactgattagtctttgcactgaagaaggtgatctagtcaagaagggagcctca
aatagtaactttttaaccatgttgccatctcctgttgattttctcaatattttcgtgcat
catcctcaatcacttatggaatttcttgaaagatacaccaacaaagtgaaggactcgcct
gctcaagtagaaatccataacacactgttggagttatacttgtctcatgatttgaacttc
ccatctctttcacaaaatagcatcaatgaaaatggtgatctgagaacagatcaactgtca
agtacagccacgatgtcagaatctaatgggaaaataattttggataggaatgatgtaaat
gaggagaaagattggcaggagaggcagcggaagggtttactcttgcttaaaagtgcatgg
ccatctgaacaggagcagccactgtatgacgttgatctcgcgataattctgtgtgaaatg
aacgctttcaaagaagggctcctttatctatatgagaagttgaaattatataaagaagtg
attgcctgctatatgcagtcacatgatcatgagggtctaattgcatgctgcaagagatta
ggggattcaggaaagggtggtgatccttctctttggtcagatctattgaactattttggt
gaacttggagaagactgctccagagaagtgaaagaaattttgatgtatattgaaagggat
gatattttgcctcctattattgttcttcaaaccttgtccagaaatccttgcctttcactt
tctgtcattaaagattatatagctcgaaagctggaacaggagtcaaagctgattgaggaa
gaccggagagctattgagaagtatcaggatgaaacttcaacaatgagaaaagaaatccag
gatcttagaacaaatgcaagaatcttccagcttagcaagtgtacagcttgcactttcacc
ctcgaccttcctgctgttcactttatgtgtatgcattcgttccatcagcgatgccttggt
gacaatgataaagaatgccccgaatgcgctcctgagtacagggctgttttagaaaagaag
aggaacttggagcagaattcgaaaaaccaagatcaattcttccagcaagtaagaaattcg
aagaatgggttttctgtaattgcagagtactttggtaaagggattatcagcaaaacaagc
aatggacctgcagaaactctaaattcaagtagtgatttttga
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