KEGG   Olea europaea var. sylvestris (wild olive): 111402221
Entry
111402221         CDS       T05244                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03082  ATP-dependent chromatin remodeling
oeu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111402221
   03083 Polycomb repressive complex
    111402221
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oeu03036]
    111402221
Enzymes [BR:oeu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111402221
Chromosome and associated proteins [BR:oeu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111402221
   HDAC complexes
    Sin3A-HDAC complex
     111402221
    BRAF-HDAC complex
     111402221
    REST complex
     111402221
    SHIP complex
     111402221
    MiDAC complex
     111402221
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111402221
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111402221
  Chromatin remodeling factors
   NuRD complex
    111402221
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111402221
NCBI-ProteinID: XP_022886153
LinkDB
Position
10:complement(39839534..39843529)
AA seq 435 aa
MDSEGGASLPSSCPDARKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYSLYRR
MEISRPFPAGPEDIRRFHSPEYVDFLSSVTPDTLHDHTHARHLKRFNVGEDCPVFDGLFP
FCQASAGGSIGAAVKLNRQDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHR
RVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKFGDFFPGTGHIKDVGANAGKNYALNVPL
NDGIDDESFRSLFRPIIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTMRNVARCWCYETAVAVDVEPDNNLPYNEYYEYFGPDYTLHLEPK
PMDNLNLPRDLEKIRNFLLDQLSKLQHVPSVPFQTTPPTTEVPEETEQDMEERVKPRIWN
GEVYESDVEEDPPLL
NT seq 1308 nt   +upstreamnt  +downstreamnt
atggactcggagggtggtgcatcgttgccgtcgtcctgtcccgacgcgcggaagcggcgc
gtgtcgtacttctacgagccgacgatcggcgattactactacggccagggccatccgatg
aagccccaccgtatccgcatggcccacaatttgattgttcactattccctctaccggcgg
atggagattagccgcccttttccggccggcccagaagacatccgccgctttcactccccc
gagtacgttgatttcctctcctccgtcacccctgatactctccacgaccacacccacgcc
cgtcacctcaagcggttcaatgtcggcgaggactgtcctgtttttgatgggcttttcccc
ttttgccaggcctccgctggtggctcaatcggcgccgccgtcaagttgaatcgtcaggac
gctgatatcgctatcaattgggctggtgggcttcaccatgcaaagaagagcgaggcttct
gggttttgctatgtcaatgatatagtgctggggattctcgagcttctcaaggttcacagg
cgcgtgctttacatagacattgatgttcaccatggagatggtgttgaggaggctttttat
gtcactgacagagtaatgacagtgtctttccataaatttggggactttttccctggaact
gggcatatcaaagatgttggagctaatgcggggaagaactatgctcttaatgttccactg
aatgatggaatagatgatgagagcttccgtagtttatttcgtcccattatccaaaaggtc
atggaggtctatcagccagatgccgttgttcttcaatgtggggcagattcattggctggt
gacaggttagggtgcttcaatttgtctgtgaaggggcatgcggattgtcttcgtttcctg
agatctttcaatgttcctctaatggttttgggtggtggagggtatacaatgcggaatgtt
gcccgctgttggtgctacgagacagcagttgcagttgatgtggaacccgataataactta
ccttacaatgagtattatgagtactttggcccggattatactcttcatttggaaccaaaa
ccgatggacaatctgaacttacctagagatctggagaagatcagaaatttcctgctcgat
caactatctaaactacaacatgtacctagtgttccttttcaaacaacgcctccaactacc
gaagtaccagaagagacggaacaagatatggaagagagagtgaaacctcggatttggaat
ggtgaggtttacgagtccgatgttgaagaagatccgcctctgctgtga

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