Olea europaea var. sylvestris (wild olive): 111402409
Help
Entry
111402409 CDS
T05244
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111402409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111402409
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
111402409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
WHD_SOWAH
Zn_Ribbon_1
DZR_2
DZR
Motif
Other DBs
NCBI-GeneID:
111402409
NCBI-ProteinID:
XP_022886462
LinkDB
All DBs
Position
10:43657151..43663032
Genome browser
AA seq
536 aa
AA seq
DB search
MSIDLILKPSCSGCGSTVDLYGSTCKHLTLCMTCGKTMAENRAECYECGTRITRLIREYN
VRSCSSNDKNYFIGRFATGLPTFKKKNENKWSLQKEGLQGRQITDALKDKYKNKPWLLED
ETGQSQYHGQLEGSQSTTYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMKN
RRKTADGYQRWMMKAANNGAAAFGEVEKLDDRESGGGSARGRKKSAEDDDETNVSDRGEE
DEEEEAARKSRLGLNKKGGDDDEEGPRGGDLDFDDDDIEKGDDWEHEEIFTDDDEAVGND
PEEREDLAPEIPAPPEIKQDEEDEDEADEEEGGLSKSGKELKKLLGRANGLSDSDGEDDD
DDDDDMEDDISPVLAPKKEALKEEPVENNSPLKAVTSGSGRGTPPTSKSSKGKRKVSGEE
SKTTNATPMKKTKTENELKSLKNESASAAKSSTPPKSVLPSAHSKTGATPPTGPVTADEI
KAVLLQKTQVTTQDLVGKFKSRLKSKEDKDAFAATLRRISKIQKTQEANYVVLRER
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctatagatttgatactgaagccgtcgtgcagtggttgtggatcgacggtggatctt
tatggcagcacctgcaagcacttgacgctttgcatgacgtgtggcaaaaccatggctgag
aaccgcgcggagtgctacgaatgtggcactcgcatcactcgcttgattagggaatacaat
gtcagatcatgctccagtaatgacaaaaattacttcattggaagatttgcgacgggttta
ccaacttttaagaagaagaacgagaataaatggtctctgcagaaagagggtcttcaaggt
cgccaaattactgatgccttgaaggataagtacaagaataagccttggctgctggaggat
gaaactggccagtctcaataccacggtcagcttgagggttcacaatcaactacatattac
cttctaatgcttcagggaaaggaatttgtagccattcctgctggttcctggtacaatttt
aacaaagtggcacaatataagcaacttactttggaggaagcggaagagaagatgaaaaat
aggaggaaaactgccgatgggtaccaaagatggatgatgaaagcggcaaacaatggagct
gccgcctttggtgaagtagaaaagcttgatgatcgggaaagtggaggtggtagtgcgagg
ggacgtaaaaaatctgctgaggatgatgatgaaaccaatgtttcagataggggagaagaa
gatgaagaagaagaggcagctagaaaaagtaggctcggactcaataaaaagggtggggat
gatgatgaagaaggaccaagaggcggtgatcttgattttgatgatgatgatattgaaaag
ggtgatgattgggagcatgaagaaattttcactgatgacgatgaagctgtcggcaatgat
cccgaggagagagaagatttggcccctgaaatcccagctcctccagaaattaagcaggat
gaagaggatgaggatgaagctgatgaagaggagggcgggctgagcaaatctggaaaggag
ttgaagaaactgctcggaagagctaatgggttgagtgactcggatggggaagatgacgat
gacgacgatgacgatatggaagatgacatttctcctgtacttgccccaaagaaggaagct
cttaaagaagaaccggttgagaacaacagtccattgaaagctgttacttctggatctggt
cgaggaaccccgcctacttctaaatcttcaaaggggaaaagaaaagttagtggtgaggag
tcgaaaacaactaatgctacacctatgaagaaaacaaaaacagaaaatgagctgaagtcc
ttgaaaaatgagagtgcgtctgcagcaaaaagtagtacacctcctaaaagtgtattacct
tcggcacattcaaaaactggggctacgccacctactggaccagttacagcagatgaaatt
aaggccgttttattgcagaagacgcaagtgaccacacaggatcttgttggcaaatttaaa
tctagactgaagtcaaaagaggacaaggatgcttttgcggctacgcttagaagaatatca
aaaatacagaagactcaagaggcaaactacgtagttttgagagagaggtaa
DBGET
integrated database retrieval system
