Olea europaea var. sylvestris (wild olive): 111403423
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Entry
111403423 CDS
T05244
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111403423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111403423
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
111403423
Prokaryotic type
Archaeal type
TFB
111403423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
RB_B
DUF7573
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
111403423
NCBI-ProteinID:
XP_022887693
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All DBs
Position
11:12775714..12779016
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AA seq
312 aa
AA seq
DB search
MADIYCSECKRPTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANEVGDNDPVRVG
GPNNPLLGDSGLSTVISKPNGSTGEYLNSSLGRWQNRGSNPDRSLIQAFKTIATMADRLG
LVATIKDRANEIYKKVEDQKPLRGRNQDAILAACIYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEFIVKQLEIEMGQSMEMGTIHAGDFLRRFCSHLGMTNLAVKAAQEAVQKSEEL
DIRRSPISIAAAVIYIITQLSDDKKLLKDITLATGVAEGTIRNSYKDLYPYTSRIVPSWY
ATEDALRNLSSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggctgatatttactgttcggagtgtaaacggccgacggaagtggtgttcgaccactcg
gcgggggacaccgtgtgctcggagtgcggcctggttctggaggcgcactccattgacgag
acctcagagtggagaacttttgcgaatgaggtcggggataatgacccggtccgtgttggt
gggccaaataatcctttgttgggtgatagtgggctttcgacggtgatttcgaagcctaat
gggtcaacgggcgagtatttgaattcgtcgttgggtcggtggcagaaccgtgggtcgaac
ccggatcggtctctcattcaggcgttcaagactattgctaccatggctgacaggttgggt
cttgttgcaacaataaaggatcgagcaaatgaaatatataagaaggtagaagatcaaaag
cctcttagaggacgaaatcaagatgctattttggctgcgtgcatctacattgcttgtcga
caagaggataagccacgtactgtaaaagaaatttgttctgtggccaatggagccaccaaa
aaagagattggtcgagcaaaagagttcattgtgaaacagctggagatcgaaatgggccag
tctatggagatgggaacaattcatgcaggggattttttgagacgtttttgctcacatttg
ggcatgaccaatttagctgtcaaagctgctcaagaagcagtacaaaaatcagaagagctg
gatataaggagaagccccatatccatagcagctgcagtaatttacataataacacaactc
tcagatgacaagaaacttctcaaagatattacactggccacaggagtagcagaaggcaca
attcgcaattcatacaaggatctctatccatacacttcaagaatcgtaccaagttggtat
gcgacagaggatgctcttaggaatctttccagcccttga
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