Olea europaea var. sylvestris (wild olive): 111403466
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Entry
111403466 CDS
T05244
Name
(RefSeq) sm-like protein LSM36B
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03018
RNA degradation
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111403466
09123 Folding, sorting and degradation
03018 RNA degradation
111403466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111403466
03041 Spliceosome [BR:
oeu03041
]
111403466
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111403466
mRNA degradation factors
5'-3' decay
Lsm complex
111403466
Spliceosome [BR:
oeu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111403466
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111403466
NCBI-ProteinID:
XP_022887746
LinkDB
All DBs
Position
11:13309821..13312661
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AA seq
91 aa
AA seq
DB search
MSGTGEKVSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
GQLKNKYGDAFIRGNNVLYISTTKRTLGEGA
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggactggagagaaggtttcagctactacaaaaactccagctgattttctgaaa
tctattcgtggtcgacctgttgttgtcaaattgaattctggcgttgactaccgaggtatc
cttgcctgtctggatggatatatgaacatagcaatggagcaaactgaagaatatgtcaat
gggcaattgaaaaataaatatggggatgcatttattcgcgggaataatgtgctttatatc
agcacaacaaagaggacattaggtgaaggggcttag
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integrated database retrieval system
