KEGG   Olea europaea var. sylvestris (wild olive): 111403860
Entry
111403860         CDS       T05244                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111403860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oeu03021]
    111403860
Enzymes [BR:oeu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     111403860
Transcription machinery [BR:oeu03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     111403860
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 111403860
NCBI-ProteinID: XP_022888263
LinkDB
Position
11:complement(25579045..25600214)
AA seq 1718 aa
MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKVVNPNLLDTLEKPIPGGLYDPAMGPLDE
NFACKTCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCLHFRSSRGEVENC
VTQLEQISEGDIIGAKRLNILQKVKEKKKKKDWVLSNDLVDPEDSEGSHISDAELQSDRR
KHSEHNKRGCWDSCQFTEAMYVLNEFLKKKEKKCKNCDGNNPKINKPTFGWFHMRGPSAN
QTRSNAIRHGRLGVSKNGGVGDKSSSEVVNASDCSWKDDSDTAEANSSVAASDSTKLSKK
RPMHLARNVSTELEKRSFSGPLLPSEVRDIVRRLWENESPICSYVCDIQQQQQHDESGKV
IGHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNVHVNSAEHSKI
INRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVI
SPDPYLAVNEIGVPPYFALRLTYPERVTPSNSAKLRNAIINGPDIHPGATTYVDKISTVK
LPLNKKMRIAISRKLPSSRGVVTQSGKKNEYECEGKIVYRHLQDGDIVLVNRQPTLHKPS
IMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIV
PTRGDTVRGLIQDHIVSAVLLTMKDTFLCREEFNQLLYGSGVFAMMPSSHPVNNSQKVSL
VDSAGVVMQSILPAVWKPGPLWTGKQVITALLNHVTRGCAPCTIKNQGKLPKDYFTDSTY
KNEEEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELFGSKSAGIFLSALSC
LFTIFLQIHGFTCGVDDLIILPNYDMERKEKLEGDDVGEEVHCDFVKFKRGQIGPEELQL
EIEKVICSNRESATASLDMKMKNKLTNKGSQISKKLLTKGLLKPFPKNCISVMTTTGAKG
STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWNFTSRAGGYITDRFLTGLRPQEY
YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGV
DVHCTSFLKNYKALADNQETICRKFQNKQEFNSYIEKLPDCLEREARHFICDARKETAEV
QKLTEMEHLPKGRKSKKKENLLEERKATEKAQNEFLELVEQKYLSSLAQSGEPVGVIAAQ
SIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFIRYRSKPDV
MSLIAHVKKVCIADLAESMEVELSINDQQVARIYKLKMKLKATEFVSLKDLHATLRSTFL
RGLEEAIENHVVFLSRISGIRNFTLSSPSETLNEADNNSTVGSLEEDMDDDMDADGVERG
EDLGSDAQKRKQQSTDEMDYDDGSDSSEDEPDEGELSSELEEQTDQDHLEEVESRKDEET
DLDDDEASNMQNDNEMKSESKSSRGGVKSTAKNKRSGEESSDKKPRRAIYIAVRGLHFEV
HFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKSVIWDDDNKPRKSTVK
DLQTSNEDLDYWAMKASGVDFKSFWEMQDDLDMSRLYSNNIDAMLKTYGVEAARATIIRE
VKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMTRHGSIAESLSPFLKMSFETASKFIVE
AASHGMTDNLETPSSRICVGLPVKMGTGCFDIMQELEV
NT seq 5157 nt   +upstreamnt  +downstreamnt
atggctcaatcaaccgagggagcgacggaagctgtggaggcggtgaaatttggtttcatg
acagatgaagaggtcaggagccacagtgttgtgaaggttgtgaaccctaatttgcttgac
actctggaaaagccaatccctggtgggctttatgatccggctatgggtcccctggatgag
aactttgcatgtaaaacatgtgggcagcggtcatatcattgtcctggtcattgtggacac
attgatctcgtttcaccagtatataatccgttgttattcaatatgctgcacaatctgtta
aacaaaacctgtttccactgtttacattttcgatcaagcagaggagaggtagagaattgt
gttacccaattagaacagatatcggagggtgacattattggggctaaaaggttgaatata
cttcagaaggtaaaagagaagaagaagaagaaggattgggtcttatcgaatgatctagtt
gatccggaggatagtgaaggaagtcatatatctgatgctgaactacaatctgatcgacga
aaacactctgagcataataagcgaggatgctgggactcttgtcagtttacagaagctatg
tatgttctgaatgaatttctgaagaagaaagaaaagaagtgcaagaattgtgatggcaat
aatccgaaaataaataaacctacctttggatggtttcatatgaggggaccatctgccaat
cagactcggtcaaatgccattcgacacggcaggttgggtgtgtcaaagaatggaggagtt
ggggataagtcttcctcggaggtggtaaatgctagtgattgttcatggaaggatgattct
gacactgctgaagccaattcatctgtagctgcctctgatagcactaaattatcgaagaag
agacccatgcatctagcaagaaatgtcagtacggaattagaaaagcgttctttttctgga
cctctcttaccgtcagaggttagagatattgttaggcgcttgtgggagaatgaatctcct
atctgctcatatgtttgtgatattcagcagcaacaacaacatgatgaatctggcaaagta
attggccactctatgtttttccttgagagtattcttgtacccccaatcaaattccggcct
ccagccaaaggtggcgattctgtaatggagcatcctcatactcttttattgggtaaagtt
ctgcaatccaatatagctttaggaaatgttcatgttaatagtgctgagcactcaaagatc
attaatcgctggatggatcttcaacaatctataaatgtattatatgatagcaaaactgcc
accggtccgggtaaaaaagatatcacttctggaatttgtcagttgctggaaaagaaagag
ggtattttccgtcagaaaatgatgggaaaaagggttaattttgcttgccgttcagttata
tctccagatccttatttggcagtcaatgagattggagttcctccgtactttgcgttgagg
ttaacctatcctgagagagtaactccttcgaatagtgccaaattgaggaatgccatcatt
aatgggccagatatccaccctggagctacaacttatgttgataaaatttcgactgtgaaa
ttaccattaaacaaaaagatgcgaatagcaatatctagaaaattaccttcatcaagaggt
gtagttacacaatcagggaagaagaatgagtatgaatgtgagggcaagatcgtgtaccgc
catttacaggacggagatattgtgctcgttaatcggcagcctacacttcacaagccaagt
ataatggcgcatgttgttcgtgtactaaagggagagaaaactcttcgcatgcattatgca
aattgcagctcctataatgctgattttgatggtgatgaaattaatgtccatttccctcaa
gatgaaatttctcgggctgaagcttataacattgtaaatgctaatgaacagtacattgtt
ccaacaaggggtgatactgtcagaggcttgattcaggatcatattgtaagtgctgtgctt
cttacaatgaaggacacatttctatgtcgtgaggagttcaaccagctgctttatggttct
ggtgtctttgcaatgatgcccagttcacatccagttaataattcccagaaggtttcttta
gttgattctgcaggtgtggtgatgcagtctatcttgcctgcagtgtggaaaccaggacct
ctttggacaggcaaacaggtcataacagcactattgaaccatgtaacacgaggttgtgca
ccttgtactattaaaaatcaggggaaacttccgaaggattattttactgatagtacctac
aaaaatgaagaagaagaagacagagatcagaatgctgaacataagttgttaatttggaaa
aatgaacttgtgcgtggagtgattgacaaggctcagtttggaaagtttggtttggtgcac
acagtacaggagctctttgggtctaaaagtgcaggaatttttctttctgctttaagttgt
cttttcacaatctttttgcagattcacgggtttacatgtggggtagatgaccttataata
ttaccaaactatgatatggaaaggaaggaaaaacttgaaggtgatgatgttggtgaagag
gttcactgtgactttgttaagttcaaacgtggccaaataggccctgaagaactgcaattg
gaaatagagaaagtcatatgcagtaacagagaatctgccactgcatccttagatatgaag
atgaaaaataaactgaccaataaaggttctcaaataagcaaaaagttgctcacaaaagga
ttattaaagccttttccaaagaactgcatttctgttatgacaacaactggggccaagggt
agcacagtcaatttccaacaaatatcttcctatctgggccaacaagagttggaaggcaaa
agagtaccccgaatggtttcaggaaaaaccttgccctgcttttcaccatggaatttcact
tctagagctggaggctatatcactgatcgctttctcactggtcttcgacctcaagagtat
tacttccattgcatggctggtcgtgaaggtttggttgatactgcagtaaaaacatctcgt
agtggatatctacaacggtgcctcataaaaaatcttgagagtctgaaagttagttatgat
tatactgtccgtgatgcagatggttcaataattcagttttattacggagaagatggcgtt
gatgtgcactgcacaagctttctaaaaaattacaaggctctagcagataatcaagaaact
atttgccgaaaatttcagaacaagcaagagttcaattcttatattgaaaagttgccagat
tgtcttgaaagggaagcaaggcactttatttgtgacgcaagaaaagagacagcagaagta
cagaaactgactgaaatggagcacctacctaaaggacgcaagtcaaaaaagaaggaaaac
ctattagaagaaaggaaggcaacagagaaggcacaaaatgagtttttagaattggttgag
caaaaatatctgtcaagtctagcacagtcaggagaaccagttggtgtcattgctgctcaa
tccattggtgaaccgtcaacacagatgacactaaacactttccatcttgccggccgcggg
gaaatgaatgttactcttggtattcctcgtctgcaggagattttgatgactgcatcagac
actatcaagactcccattttaacatgcccattcatacgatacagatctaagcctgatgtt
atgtctcttattgcgcatgtgaagaaagtatgtatagcggatttggcagagagcatggaa
gttgaactctcaattaatgaccagcaagtggctagaatctacaagctgaaaatgaaattg
aaagcaactgaatttgtgtcattaaaagacctacatgcaactctcagatccacgttctta
aggggattggaggaggcaatagaaaatcacgtggtgttcctatccagaattagtggaatt
agaaatttcacgttgagttcaccgtcagagacgttaaatgaagctgacaataattctaca
gttggatcactagaagaagacatggacgatgatatggatgctgatggtgttgaaagggga
gaggatctaggttcagatgcacaaaagagaaaacaacaatctacggacgagatggattat
gatgatggttctgattcctctgaagatgaacctgatgaaggtgagttatcttctgaactt
gaagaacaaactgatcaagatcatctcgaggaggttgagagtaggaaggatgaggaaact
gacttagatgacgatgaagcttctaatatgcaaaatgataatgaaatgaagtcagagtct
aaatcaagtcggggtggcgtcaaatcaacggctaaaaataaaagatcaggagaagaatct
tcggacaagaaaccgcgcagggcaatctacattgcagttagaggattgcatttcgaagtc
cactttaaatttacaatggaacctcatttgttacttgctcagattgctcagaagactgca
aagaaagtatatatcaagagctccggcaagatcagtcattgtaaaatggtaaaatatgat
gcagatgaaaaatcagttatttgggacgacgataacaagccaagaaagtccactgttaag
gatttgcagacaagcaacgaagaccttgattattgggcaatgaaggcatcaggagtcgat
ttcaagtcattctgggaaatgcaagacgacctcgatatgagccgtttgtactccaacaat
attgatgctatgttgaagacctatggggtagaagctgctcgagctactatcataagagag
gtgaagcaagtttttgatatttacggagtaaagattgactatcgacatttgagtttaatc
gcggattacatgacccatacggggggttaccgaccaatgaccagacacggaagcattgct
gagtcattgtcaccgtttcttaagatgtcgttcgaaacagcctcaaagttcattgtagaa
gcagcttctcatgggatgaccgacaacttggagacaccatcttctaggatttgcgttggc
ttgcctgtaaagatgggtacaggttgttttgacatcatgcaggaattggaagtatga

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