Olea europaea var. sylvestris (wild olive): 111403860
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Entry
111403860 CDS
T05244
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111403860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111403860
Enzymes [BR:
oeu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111403860
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
111403860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
111403860
NCBI-ProteinID:
XP_022888263
LinkDB
All DBs
Position
11:complement(25579045..25600214)
Genome browser
AA seq
1718 aa
AA seq
DB search
MAQSTEGATEAVEAVKFGFMTDEEVRSHSVVKVVNPNLLDTLEKPIPGGLYDPAMGPLDE
NFACKTCGQRSYHCPGHCGHIDLVSPVYNPLLFNMLHNLLNKTCFHCLHFRSSRGEVENC
VTQLEQISEGDIIGAKRLNILQKVKEKKKKKDWVLSNDLVDPEDSEGSHISDAELQSDRR
KHSEHNKRGCWDSCQFTEAMYVLNEFLKKKEKKCKNCDGNNPKINKPTFGWFHMRGPSAN
QTRSNAIRHGRLGVSKNGGVGDKSSSEVVNASDCSWKDDSDTAEANSSVAASDSTKLSKK
RPMHLARNVSTELEKRSFSGPLLPSEVRDIVRRLWENESPICSYVCDIQQQQQHDESGKV
IGHSMFFLESILVPPIKFRPPAKGGDSVMEHPHTLLLGKVLQSNIALGNVHVNSAEHSKI
INRWMDLQQSINVLYDSKTATGPGKKDITSGICQLLEKKEGIFRQKMMGKRVNFACRSVI
SPDPYLAVNEIGVPPYFALRLTYPERVTPSNSAKLRNAIINGPDIHPGATTYVDKISTVK
LPLNKKMRIAISRKLPSSRGVVTQSGKKNEYECEGKIVYRHLQDGDIVLVNRQPTLHKPS
IMAHVVRVLKGEKTLRMHYANCSSYNADFDGDEINVHFPQDEISRAEAYNIVNANEQYIV
PTRGDTVRGLIQDHIVSAVLLTMKDTFLCREEFNQLLYGSGVFAMMPSSHPVNNSQKVSL
VDSAGVVMQSILPAVWKPGPLWTGKQVITALLNHVTRGCAPCTIKNQGKLPKDYFTDSTY
KNEEEEDRDQNAEHKLLIWKNELVRGVIDKAQFGKFGLVHTVQELFGSKSAGIFLSALSC
LFTIFLQIHGFTCGVDDLIILPNYDMERKEKLEGDDVGEEVHCDFVKFKRGQIGPEELQL
EIEKVICSNRESATASLDMKMKNKLTNKGSQISKKLLTKGLLKPFPKNCISVMTTTGAKG
STVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFSPWNFTSRAGGYITDRFLTGLRPQEY
YFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVSYDYTVRDADGSIIQFYYGEDGV
DVHCTSFLKNYKALADNQETICRKFQNKQEFNSYIEKLPDCLEREARHFICDARKETAEV
QKLTEMEHLPKGRKSKKKENLLEERKATEKAQNEFLELVEQKYLSSLAQSGEPVGVIAAQ
SIGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDTIKTPILTCPFIRYRSKPDV
MSLIAHVKKVCIADLAESMEVELSINDQQVARIYKLKMKLKATEFVSLKDLHATLRSTFL
RGLEEAIENHVVFLSRISGIRNFTLSSPSETLNEADNNSTVGSLEEDMDDDMDADGVERG
EDLGSDAQKRKQQSTDEMDYDDGSDSSEDEPDEGELSSELEEQTDQDHLEEVESRKDEET
DLDDDEASNMQNDNEMKSESKSSRGGVKSTAKNKRSGEESSDKKPRRAIYIAVRGLHFEV
HFKFTMEPHLLLAQIAQKTAKKVYIKSSGKISHCKMVKYDADEKSVIWDDDNKPRKSTVK
DLQTSNEDLDYWAMKASGVDFKSFWEMQDDLDMSRLYSNNIDAMLKTYGVEAARATIIRE
VKQVFDIYGVKIDYRHLSLIADYMTHTGGYRPMTRHGSIAESLSPFLKMSFETASKFIVE
AASHGMTDNLETPSSRICVGLPVKMGTGCFDIMQELEV
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatcaaccgagggagcgacggaagctgtggaggcggtgaaatttggtttcatg
acagatgaagaggtcaggagccacagtgttgtgaaggttgtgaaccctaatttgcttgac
actctggaaaagccaatccctggtgggctttatgatccggctatgggtcccctggatgag
aactttgcatgtaaaacatgtgggcagcggtcatatcattgtcctggtcattgtggacac
attgatctcgtttcaccagtatataatccgttgttattcaatatgctgcacaatctgtta
aacaaaacctgtttccactgtttacattttcgatcaagcagaggagaggtagagaattgt
gttacccaattagaacagatatcggagggtgacattattggggctaaaaggttgaatata
cttcagaaggtaaaagagaagaagaagaagaaggattgggtcttatcgaatgatctagtt
gatccggaggatagtgaaggaagtcatatatctgatgctgaactacaatctgatcgacga
aaacactctgagcataataagcgaggatgctgggactcttgtcagtttacagaagctatg
tatgttctgaatgaatttctgaagaagaaagaaaagaagtgcaagaattgtgatggcaat
aatccgaaaataaataaacctacctttggatggtttcatatgaggggaccatctgccaat
cagactcggtcaaatgccattcgacacggcaggttgggtgtgtcaaagaatggaggagtt
ggggataagtcttcctcggaggtggtaaatgctagtgattgttcatggaaggatgattct
gacactgctgaagccaattcatctgtagctgcctctgatagcactaaattatcgaagaag
agacccatgcatctagcaagaaatgtcagtacggaattagaaaagcgttctttttctgga
cctctcttaccgtcagaggttagagatattgttaggcgcttgtgggagaatgaatctcct
atctgctcatatgtttgtgatattcagcagcaacaacaacatgatgaatctggcaaagta
attggccactctatgtttttccttgagagtattcttgtacccccaatcaaattccggcct
ccagccaaaggtggcgattctgtaatggagcatcctcatactcttttattgggtaaagtt
ctgcaatccaatatagctttaggaaatgttcatgttaatagtgctgagcactcaaagatc
attaatcgctggatggatcttcaacaatctataaatgtattatatgatagcaaaactgcc
accggtccgggtaaaaaagatatcacttctggaatttgtcagttgctggaaaagaaagag
ggtattttccgtcagaaaatgatgggaaaaagggttaattttgcttgccgttcagttata
tctccagatccttatttggcagtcaatgagattggagttcctccgtactttgcgttgagg
ttaacctatcctgagagagtaactccttcgaatagtgccaaattgaggaatgccatcatt
aatgggccagatatccaccctggagctacaacttatgttgataaaatttcgactgtgaaa
ttaccattaaacaaaaagatgcgaatagcaatatctagaaaattaccttcatcaagaggt
gtagttacacaatcagggaagaagaatgagtatgaatgtgagggcaagatcgtgtaccgc
catttacaggacggagatattgtgctcgttaatcggcagcctacacttcacaagccaagt
ataatggcgcatgttgttcgtgtactaaagggagagaaaactcttcgcatgcattatgca
aattgcagctcctataatgctgattttgatggtgatgaaattaatgtccatttccctcaa
gatgaaatttctcgggctgaagcttataacattgtaaatgctaatgaacagtacattgtt
ccaacaaggggtgatactgtcagaggcttgattcaggatcatattgtaagtgctgtgctt
cttacaatgaaggacacatttctatgtcgtgaggagttcaaccagctgctttatggttct
ggtgtctttgcaatgatgcccagttcacatccagttaataattcccagaaggtttcttta
gttgattctgcaggtgtggtgatgcagtctatcttgcctgcagtgtggaaaccaggacct
ctttggacaggcaaacaggtcataacagcactattgaaccatgtaacacgaggttgtgca
ccttgtactattaaaaatcaggggaaacttccgaaggattattttactgatagtacctac
aaaaatgaagaagaagaagacagagatcagaatgctgaacataagttgttaatttggaaa
aatgaacttgtgcgtggagtgattgacaaggctcagtttggaaagtttggtttggtgcac
acagtacaggagctctttgggtctaaaagtgcaggaatttttctttctgctttaagttgt
cttttcacaatctttttgcagattcacgggtttacatgtggggtagatgaccttataata
ttaccaaactatgatatggaaaggaaggaaaaacttgaaggtgatgatgttggtgaagag
gttcactgtgactttgttaagttcaaacgtggccaaataggccctgaagaactgcaattg
gaaatagagaaagtcatatgcagtaacagagaatctgccactgcatccttagatatgaag
atgaaaaataaactgaccaataaaggttctcaaataagcaaaaagttgctcacaaaagga
ttattaaagccttttccaaagaactgcatttctgttatgacaacaactggggccaagggt
agcacagtcaatttccaacaaatatcttcctatctgggccaacaagagttggaaggcaaa
agagtaccccgaatggtttcaggaaaaaccttgccctgcttttcaccatggaatttcact
tctagagctggaggctatatcactgatcgctttctcactggtcttcgacctcaagagtat
tacttccattgcatggctggtcgtgaaggtttggttgatactgcagtaaaaacatctcgt
agtggatatctacaacggtgcctcataaaaaatcttgagagtctgaaagttagttatgat
tatactgtccgtgatgcagatggttcaataattcagttttattacggagaagatggcgtt
gatgtgcactgcacaagctttctaaaaaattacaaggctctagcagataatcaagaaact
atttgccgaaaatttcagaacaagcaagagttcaattcttatattgaaaagttgccagat
tgtcttgaaagggaagcaaggcactttatttgtgacgcaagaaaagagacagcagaagta
cagaaactgactgaaatggagcacctacctaaaggacgcaagtcaaaaaagaaggaaaac
ctattagaagaaaggaaggcaacagagaaggcacaaaatgagtttttagaattggttgag
caaaaatatctgtcaagtctagcacagtcaggagaaccagttggtgtcattgctgctcaa
tccattggtgaaccgtcaacacagatgacactaaacactttccatcttgccggccgcggg
gaaatgaatgttactcttggtattcctcgtctgcaggagattttgatgactgcatcagac
actatcaagactcccattttaacatgcccattcatacgatacagatctaagcctgatgtt
atgtctcttattgcgcatgtgaagaaagtatgtatagcggatttggcagagagcatggaa
gttgaactctcaattaatgaccagcaagtggctagaatctacaagctgaaaatgaaattg
aaagcaactgaatttgtgtcattaaaagacctacatgcaactctcagatccacgttctta
aggggattggaggaggcaatagaaaatcacgtggtgttcctatccagaattagtggaatt
agaaatttcacgttgagttcaccgtcagagacgttaaatgaagctgacaataattctaca
gttggatcactagaagaagacatggacgatgatatggatgctgatggtgttgaaagggga
gaggatctaggttcagatgcacaaaagagaaaacaacaatctacggacgagatggattat
gatgatggttctgattcctctgaagatgaacctgatgaaggtgagttatcttctgaactt
gaagaacaaactgatcaagatcatctcgaggaggttgagagtaggaaggatgaggaaact
gacttagatgacgatgaagcttctaatatgcaaaatgataatgaaatgaagtcagagtct
aaatcaagtcggggtggcgtcaaatcaacggctaaaaataaaagatcaggagaagaatct
tcggacaagaaaccgcgcagggcaatctacattgcagttagaggattgcatttcgaagtc
cactttaaatttacaatggaacctcatttgttacttgctcagattgctcagaagactgca
aagaaagtatatatcaagagctccggcaagatcagtcattgtaaaatggtaaaatatgat
gcagatgaaaaatcagttatttgggacgacgataacaagccaagaaagtccactgttaag
gatttgcagacaagcaacgaagaccttgattattgggcaatgaaggcatcaggagtcgat
ttcaagtcattctgggaaatgcaagacgacctcgatatgagccgtttgtactccaacaat
attgatgctatgttgaagacctatggggtagaagctgctcgagctactatcataagagag
gtgaagcaagtttttgatatttacggagtaaagattgactatcgacatttgagtttaatc
gcggattacatgacccatacggggggttaccgaccaatgaccagacacggaagcattgct
gagtcattgtcaccgtttcttaagatgtcgttcgaaacagcctcaaagttcattgtagaa
gcagcttctcatgggatgaccgacaacttggagacaccatcttctaggatttgcgttggc
ttgcctgtaaagatgggtacaggttgttttgacatcatgcaggaattggaagtatga
DBGET
integrated database retrieval system