Olea europaea var. sylvestris (wild olive): 111403917
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Entry
111403917 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oeu03009
]
111403917
03036 Chromosome and associated proteins [BR:
oeu03036
]
111403917
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111403917
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111403917
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
111403917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
DD_DDX21-DDX50
ResIII
NatA_aux_su
FlpD
CMS1
LIAS_N
Motif
Other DBs
NCBI-GeneID:
111403917
NCBI-ProteinID:
XP_022888351
LinkDB
All DBs
Position
11:complement(27194775..27199811)
Genome browser
AA seq
689 aa
AA seq
DB search
MASGSVSKSASLDKKKKVKKGSIDGPEIEDFIEKKSKKEKKTKISSDDSNIKKKEKRKRK
DTEVDNEEEERSETSSEMGEPMNLNKKKKMKFDEEENENEEEENPNAVSNFRISKPLREA
LKAKGIESLFPIQAMTFDTILDGVDLVGRARTGQGKTLAFVLPILESLTNGPTKASRKTG
YGRTPSVLVLLPTRELATQVFSEFEFYGGALGLTSCCLYGGSPYQPQHVQLKRGVDIVIG
TPGRIKDHIERGNIDFSSLKFRVLDEADEMLRMGFVEDVELILGKVEDASKVQTLLFSAT
LPEWVKHIASKFLKRDKKTADLVGNEKMKASTSVRHIVLPCSTSARSQLIPDIIRCYSSG
GRTIIFTETKDSASTLSGVLPGARALHGDIQQATREVTLAGFRSGKFLTLVATNVAARGL
DIDDVQLIIQCEPPRDVEAYIHRSGRTGRAGKTGVAVMLYDPRKSNFSRIERESGVKFEH
ISAPQPADIAKAAGAEAAEKINEISDSVIPVFKAAAEELLNTSTLSPTELLAKALAKAAG
YTEIKSRSLLSSMENSVTVLLQCEKPIYTPSFAFGVLRRFLPEEKVESIKGLALTADGKG
AVFDVAAEDLDTFLTGQENAAGISLEVVKSLPPLQERESRGGRFGGGRGGFSDRRDGRFG
GGRGGRGGFSDRRNDRFSRAPRGGRGRSW
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggtagtgtatcaaagtctgcatccttggacaagaaaaagaaagtgaagaag
ggttccattgacggtccggagattgaggattttattgagaaaaagagcaaaaaagagaag
aagacaaaaatatcctccgacgattcgaatattaagaaaaaagaaaaaaggaagcgtaag
gatacggaggttgacaatgaggaagaggagaggagcgagactagctcggagatgggcgag
ccgatgaatttgaataagaagaaaaagatgaagtttgatgaggaggaaaacgaaaacgag
gaggaagagaatccgaatgccgtctcgaatttccggatatcaaagccgttgagggaggcc
ttgaaggctaaggggatcgaatctctgttcccaatacaggccatgacttttgataccatc
ctcgatggggtcgatttggttggtagggctcgtactggtcaggggaaaacattggccttt
gtgctacccatattggagtcattgactaatggacctacaaaagcttcaagaaagacagga
tatgggaggacaccaagtgttcttgtgcttttacccactagagaattggccactcaggtg
ttttctgaatttgaattctatggcggagcattgggattgacttcgtgttgcctgtatggg
gggtctccttatcaaccgcagcatgttcagttgaaaaggggagttgacattgtaattggc
actcctggccgcattaaggatcacatagagagggggaatattgactttagctcactgaag
ttccgtgtccttgatgaggctgatgagatgttgaggatgggttttgttgaagatgttgaa
ctaattctaggcaaggtagaggatgcgagcaaagttcaaacacttctatttagtgccact
ttgccagaatgggtgaagcatattgcatctaagtttctgaaaagggataagaaaactgct
gatcttgttggcaatgagaaaatgaaggctagtaccagcgtgaggcacattgttcttcct
tgctccacttctgccagatctcaacttattcctgacatcattcgctgctatagtagtggt
ggccgcactattattttcaccgagacaaaggattccgcttccacactttctggcgtgttg
cccggagcacgggctttgcatggggacatacaacaggctacacgtgaggtaacacttgct
ggattcaggtcaggaaaatttttaacacttgtggccacaaatgtggcagcacgtggattg
gatattgatgatgtccagttgattattcagtgcgagccaccacgtgatgtagaggcatat
atacatcggtctggacgaactgggagagcggggaaaactggtgttgctgtaatgctttat
gatccaagaaagtcaaatttttctaggatagagagagaatcaggcgtgaagttcgaacac
atatctgctccacagccagctgatatagctaaagctgctggagctgaagcagctgaaaaa
atcaatgagatctctgatagtgtcattccggtcttcaaggctgctgctgaagaactcctg
aacacatctactttatcaccaactgaactacttgcaaaagcacttgctaaagctgctggc
tatactgaaataaagagtcgatcacttctcagttcaatggagaactctgttacagttctt
cttcagtgtgaaaagcccatctacacaccatcctttgcttttggggttttgcggaggttt
ttacctgaagagaaggtcgagtccattaagggtcttgctttaacagctgatggaaagggc
gcagtttttgatgttgctgctgaagacttggacacattccttacaggccaggaaaatgct
gctggcataagcttagaggtagtgaaatcattaccgcctttgcaagaaagagagtcaaga
ggcggacggtttggaggtggacgtggtggcttttctgataggagagatggtaggttcggt
gggggacgaggaggcagaggcgggttttctgatcggcgaaatgataggttttccagagct
cctagaggaggaagaggtcgcagttggtga
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