KEGG   Olea europaea var. sylvestris (wild olive): 111404149
Entry
111404149         CDS       T05244                                 
Name
(RefSeq) protein RRC1-like isoform X1
  KO
K12842  U2-associated protein SR140
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111404149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:oeu03041]
    111404149
Spliceosome [BR:oeu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    111404149
 Complex B
    111404149
SSDB
Motif
Pfam: Surp RRM_1 cwf21 CID RRM_7 CTK3 Ddi2_HDD
Other DBs
NCBI-GeneID: 111404149
NCBI-ProteinID: XP_022888675
LinkDB
Position
11:33604861..33617055
AA seq 966 aa
MYWEGFTTKKPRNRIFSFSISRKVRAFCDRMSSRKKTPFQKHREEEEAKKKRVEDETARL
YQEFLESFQADDTPGSKTFVRGGTINPNDRLKNDSEGGKSKDENSGLKKGSRYVPSFIPP
PMATKGKDYEKKMEEKSKEKLKGKSRNIDHFMEELKHEQEMREKRNQEREHWRDTHPGDN
SAPSSRFDELPDDFDLTGKPGSFDEGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASV
KIMWPRTEEEKRRQRNCGFVAFMNRADAQAARDEMQGVVVYEYELKMGWGKSVSLPSQAL
PAPPPGHMAIRSKEGATVILSGLSGPPVTSVPSQNSELVLTPNVPDINVVAPDDNHLQHV
IDTMALYVLDGGCAFEQAIMECGRGNPLFSFLFDLSSKEHTYYVWRLYSFAQGDTLQRWR
TEPFIMITSSGRWIPPPLPTLKGPEYEKESENTYAAGKTKRIEVERTLTDAQRDEFEDML
RAMTLERSQIKEAMGFSLDNADAAGEVVEVLTESLTLKETPIPTKVARLMLVSDILHNSS
APVKNASAYRTKFEGTLPDIMESFNDLYRGITGRITAEALKERVLKVLQVWADWFLFSDA
YVNGLRATFLRSGNSGVIPFHSICGDAPELDSKVSSDGTVDGVKTNQDAALAIGKGAAMQ
ELLNLPLTELERRCRHNGVSLIGGREMMVARLLYLEEAEKQRGLDDELKSAQNQSNRGRY
PSGRTETKFEMDPEGMSRRKSNLDDDMKSKRTESLSVLNPLSQPELNSFMSSANNGSLLP
TSKWAREDVEIDEEQERKAKDLGLTYSSSGSERAGESLSITEEVESAAVASNSSHLDGGM
NEEQRQKLRRLEVDLMEYREALEEEGIKSPQEIERKVATRRSRLQSEFSILDTNTDSSRK
MPSLDRRDRRGDSHEPSKKRRRNQSRSESPQRKFSTRDRDRDGGQQKSGSRERDDHVRDR
ERRRVK
NT seq 2901 nt   +upstreamnt  +downstreamnt
atgtactgggagggttttaccacaaaaaaacctaggaaccggatttttagtttctcaatt
agcaggaaagttagagcattttgtgatagaatgagttcccgaaagaagacaccttttcag
aagcacagagaagaggaagaggcaaagaaaaaaagggtggaggatgaaacagctaggtta
tatcaagagtttttagaatcgtttcaagcggatgatacgcctgggtccaagacctttgtc
agaggtggaaccatcaatccaaatgatcggctaaagaatgattctgaaggtggaaagtcc
aaagatgagaattctggtttaaagaaggggagtaggtatgtgccatcattcattccacct
cctatggcaacaaagggtaaagattatgaaaagaagatggaggagaagtcaaaggagaaa
ctaaaaggaaagtcccggaacattgatcattttatggaggagttgaagcatgaacaagaa
atgagggagaagcgaaatcaagagcgtgaacattggcgcgatactcatcctggtgacaat
tctgctccatccagccggtttgatgagctgcctgatgattttgatttgactggtaaacct
ggatcatttgacgaaggagatccacaaacgacaaatctttatgtcggaaacttgtcacct
caggttgatgagaatttccttttgcggacttttgggagatttggacctattgccagtgtc
aaaataatgtggccgagaacagaagaggaaaagaggaggcagaggaattgtgggtttgta
gctttcatgaacagggctgatgctcaggctgcaagggatgaaatgcaaggggtggtggtt
tatgaatatgaattgaagatggggtggggtaaatctgtctctcttccatcccaagctctt
cctgctccacctcctggacatatggccatcaggagtaaggagggtgccactgtcatcttg
tctggtttgtctggtcctccagtgacatcagttccgagccaaaattctgagctggttctc
actccaaatgtacctgatattaatgttgttgcaccagatgacaatcatctgcaacatgtt
attgatacaatggctctctatgttcttgatggtggctgtgcattcgagcaagctataatg
gagtgcggccgtggaaatcctctttttagttttttgttcgatcttagttccaaggagcat
acttactatgtttggaggctatactcatttgctcagggggatacacttcagcgatggcga
acagagccatttatcatgataaccagtagtgggagatggataccgccacctctaccaaca
ttgaaaggaccagaatatgaaaaggagtctgagaacacttatgcagctgggaaaacaaag
cgaatagaagtggaacgaacattgactgatgcccaaagagatgaatttgaggacatgcta
cgtgcgatgactttagaaagaagccagattaaagaagctatgggtttttccttggataat
gctgatgcagctggagaggtggttgaagtgctaactgagtccctgacgcttaaagagact
cccatcccgacaaaagttgcacgactcatgcttgtttcagacattttacataatagtagt
gctcctgtaaagaatgcatctgcatatcgcaccaaatttgaaggaactctaccagacatt
atggaaagctttaatgacttgtatcgtggtataacaggacgaataacagctgaggccctt
aaggaacgtgttctgaaagttcttcaagtgtgggctgactggtttctgttttcggatgcg
tatgtgaatgggttgcgagctacctttctccgttcgggtaactcgggtgtgattcctttt
cattctatatgtggtgatgcccctgagctagacagtaaggttagttccgatggcacggtt
gatggggtcaagactaaccaagatgctgcattggcaattgggaaaggagctgccatgcag
gagctgttgaacttgcctcttactgagctagagagacgatgcagacacaatggagtatcg
cttattggtggaagagaaatgatggttgcgaggttactttatctggaagaggcagaaaag
caaaggggtttagatgacgaactgaagtctgcacaaaaccaatccaatagaggcagatat
ccgagtggccgaactgaaacaaaatttgaaatggatccagagggtatgtcaagaaggaaa
agtaatttggacgacgatatgaagtcaaaaagaacagaatccttatccgtgttgaatccc
ctttcacagcctgaacttaactcctttatgagttcagcaaataatggatctttgctgcca
acctctaagtgggccagggaggatgttgaaattgatgaggaacaagaaagaaaagcaaag
gatctggggttaacttattcgtcttctgggagtgaacgagcaggtgaaagtcttagtata
actgaggaagtggagtccgcagctgttgcaagcaattcatcacatcttgatggtggaatg
aatgaagaacagaggcaaaaattgaggcgtctagaggttgatttgatggaatatcgtgag
gctctcgaggaggaaggaataaagagtcctcaggaaattgaaagaaaagtggctacacgc
cgtagtaggctacaatctgaattcagtatattggacaccaacacagattccagtagaaag
atgccatctttagacaggagggacagaagaggtgattctcatgaaccttcaaagaagcgt
aggcgtaaccaaagcagaagtgaaagccctcaacggaaattctccaccagagatcgggac
cgggatggtggtcaacagaaaagtggaagcagggaacgggatgatcatgtaagagacagg
gagaggagaagggtgaaataa

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