Olea europaea var. sylvestris (wild olive): 111404196
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Entry
111404196 CDS
T05244
Name
(RefSeq) dicer-like protein 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oeu03036
]
111404196
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111404196
microRNA pathway
RISC loading complex
111404196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
dsrm
DND1_DSRM
PAZ
Cas3-like_C_2
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
111404196
NCBI-ProteinID:
XP_022888733
LinkDB
All DBs
Position
11:34630320..34654119
Genome browser
AA seq
1491 aa
AA seq
DB search
MTPQTLLHNLSHCFIRIDQVSLLIFDECHYAQLESNHPYAEIMKIFYKADMAKLPRIFGM
TASPKLGKGGSIDSLEALLHAKIYSVEDKDELEEFVTSPKVNVYYYDSTENGYSCPQNIY
ARKLEEMKHQCLSALRMDTADRTLLKNTKKLLQRLHSNLIFCLSNLGLWGALQASNIFLK
GDHSERSELVEAEGNCSDDDLCDKYLNQAATMFASDCREDGKETDLSSMELLREPFFSRK
LKQLIEILSNFRLQPNMKCIIFVNRIVTARSLSYILNKLKFISSWRCNFLVGVHSGLKSM
SRKNTNIILEKFRSGEINLLIATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMP
QSEYVFLVDRGNPKELSLIDHFTKDEAQMNEEISSREYKEGFNNVEERTYKVDATGATIS
SVSSISLLHRYCSKLPHDEYFTPKPQFFCYDEADGKVCKIILPANAGVHQIVSEPQQSTD
MAKRDACLKACKELHENGALTDYLLPEQEDKSEDSIQDFSDSDSCDDEESRIEFHEMLVP
AALREPWIEMENSTCLSSYYIKFFPNPVDRVYKRFGIFMKSPLPEEAEKMKLDLCLARGR
TVMTELIPSGVARLNKDEIALAEKFQQMFLKVILDRSEFIPEYVSLENHDVYESRSSTFY
LMLPITQNENKKISVDWMTVKRCLSSPIFKYPGNSAEDKICRLNDYLHLANGCKCKNDVV
NSLVYVPCKETFFFIDDVVPEKDGYSLYNESENQMEHYIKRFDIRLSHPRQPLLKAKQLF
VLTNLLRKKGYSETREKEEHFIELPPEICQLKIIGFSKDIGSSLYLIPSIIHRLESLLVA
IELKDKLYASFPEGAEITANRILEALTTERCCEKFSLERLEVLGDAFLKFAVGIHLFLKN
DALDEGQLTRKRSNIVNNSNLLKLATRNNLQVYIRDQSFEPLHFYAYGRPCPVICNKDAE
KSIHSRYCSKTNGTDAEVRCNKSHHWLRKKTIADVVEALVGAFIVDSGFKAATAFLKWIG
IHVEVSASQLDKVCLASSAFLPLADLIDVSYVENLLGYDFSRKGLLIQAFVHPSYNTHSG
GCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSMCVNNISFADVAGRWSFHKLI
ICNSKDLRNSMTKYVDSIGVSASGGAQIEEKTSPKALGDLVESYMGAVFLDTGLNLNRVW
EIMLSLLDPIIDVSKLRYNPLKELRELCQFYDWKLQFPSSKKDGKYSVEAKVNGNDVSAT
ACATNISRKAAKRIAAQQVFKHLKGKGYKSKSKPLVELLKKCEKKEAKLIGYEDMFSFLT
SKFDELKLHEAFEVVKSKVSSLDEMPQINYETYPIPSRQPSFSNKASECNRTLNIQINGS
NVDSPSICPSADCNLDSRETGTFHNGSAKSRLYEVCVANCWKPPIFHCCKETGPSHIKEF
TFKVGMEIDEMPDEIFEFYGEPQAKKKDAAHSAANGALWYLKHEGFLRCKD
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgacacctcaaacactgttgcataatctatctcactgctttatccggattgatcaagtt
tcccttctgatatttgatgaatgtcattatgcacaacttgaaagcaatcatccttacgct
gaaatcatgaagattttctacaaagcagatatggcaaaacttccccgcatatttggcatg
actgcatctccaaaattagggaaagggggttcaattgatagtctcgaggctttactgcat
gcgaagatttattctgttgaagacaaagatgaactggaagaattcgtaacatcccctaaa
gtaaatgtatattattacgattcaactgaaaatggctactcttgccctcaaaatatctat
gccagaaaacttgaggagatgaagcaccagtgcctgtcagctctccggatggatacagct
gaccgaactctgcttaagaacactaagaagttgcttcaaaggctgcatagtaacctaata
ttttgtttgtcaaatcttggactctggggggcattacaggctagcaacattttcctgaaa
ggcgatcattctgagcgctctgagcttgtggaggcagaagggaattgcagtgatgatgat
ttatgtgacaaatatttgaatcaggctgccacaatgtttgcttctgattgcagggaagat
ggcaaggaaactgatttatcctccatggagcttttgagggagccctttttctcaagaaag
ctcaaacagcttattgaaattctctccaattttagattacaaccaaatatgaagtgcata
atttttgtcaataggattgtgactgcaagatccctctcatatatactcaacaagctcaag
ttcatatcttcttggaggtgcaatttccttgtaggagtgcattctggactcaagagcatg
tcgcgtaaaaatacgaacatcattcttgagaagtttcgctccggtgagataaatctattg
attgcaacaaaagtgggtgaggagggacttgatattcagacatgttgccttgttatacgg
tttgatcttccagaaactgttgctagttttatacaatctagaggtcgagcacgtatgccc
cagtctgaatatgtatttttggtggacaggggcaacccaaaggagctcagtttgatagac
cattttacaaaagacgaagctcagatgaatgaagaaatttcatcaagagaatataaagag
gggttcaataatgttgaggaaagaacctataaagtggatgctaccggggcgactattagt
tctgtatcaagtatctcattgcttcaccgctattgttcaaagcttcctcatgacgagtac
ttcaccccaaaaccacagttcttctgctacgacgaagcagatggaaaggtttgcaaaata
attctccccgctaatgctggagttcatcaaattgtcagtgaaccgcaacagtcaacggat
atggctaagagagatgcctgtttaaaagcatgcaaagaattgcatgaaaatggtgctctg
acagattatctcttgccagaacaagaagataaatctgaggactcaattcaggatttctct
gattctgacagctgtgatgatgaggaatcacgaattgaattccatgagatgcttgttcct
gctgcccttagagaaccttggatagaaatggagaattccacttgtttgagctcctactat
ataaaatttttccctaatcctgtggatagagtttataaaaggtttggtattttcatgaaa
tcgccactcccagaagaggccgagaaaatgaagcttgatctttgtttggctcgtggtaga
acagtaatgacagagcttattccatctggagttgctagattaaataaagatgagatcgca
ttagcagaaaaattccagcagatgttcctcaaagtcattctggatcggtctgaatttatc
ccagaatatgtttcgttagaaaatcatgatgtttacgagtcgagatcatcaaccttctac
ctaatgctccctattactcagaacgagaataaaaaaatttctgtagactggatgacagtc
aaaagatgtttgtcgtcaccaatttttaaatatcctggaaatagtgcggaagacaaaatt
tgtcgacttaatgactacttgcatcttgccaatggttgcaaatgtaagaatgatgtcgtg
aacagtttggtgtatgtcccatgcaaggagacatttttctttatagatgatgttgttccg
gagaaagatggatacagtttgtacaatgaatcagaaaatcaaatggagcactatattaag
aggtttgatattcgcctttcacaccccaggcaaccccttttgaaagcgaaacaacttttt
gttttgaccaacttgcttcgcaagaaaggatattcagaaacacgtgaaaaagaagaacac
ttcatcgaattaccacctgagatttgtcagttgaagataattgggttctctaaagatatt
ggaagttcattatatcttataccatcaatcattcatcgccttgaaagcttgcttgtggca
attgaattgaaggataagttatatgcttcattccccgagggagctgaaattactgctaac
cgtattcttgaagctctcacgactgaaagatgctgtgagaaattttctctggaaaggctt
gaagtgcttggggatgcatttctcaagtttgcagttggaatacatctctttcttaagaac
gatgccctagatgaagggcagctgaccagaaagcgttctaacattgtaaacaattctaat
ttactcaagctggcaacaagaaataacttacaggtatatatacgtgatcaatcatttgaa
cctctccatttctatgcatatggtcgtccttgtcctgtaatttgcaacaaggatgctgaa
aaaagtatacactctagatactgtagtaagacaaacggtacagatgctgaagttagatgc
aacaagagtcatcactggttacgcaagaaaactattgcagatgttgttgaggcacttgtt
ggagcctttatagttgatagcggcttcaaagcagcaacggcatttctaaaatggattggg
atacatgtagaggtgtctgcatcgcaacttgacaaagtctgccttgcaagctcggcattt
ctgccccttgctgatctgattgatgttagttacgttgagaatctgttaggatatgacttt
tcccgtaagggtttgctgatccaggcctttgtccatccttcttataacacacactcagga
ggttgctaccagagacttgagtttcttggggatgcagtcttggattatctgatcacttcc
tatctgtattcagcatatcctaaattaaaacctggacagttgaccgatttgagatcaatg
tgcgtaaacaacatttcatttgctgacgtagctggacgatggtctttccacaaattaatt
atttgcaattctaaagatctccgcaattcaatgaccaaatacgttgactccattggagta
tcagcatcagggggggcgcaaattgaagagaaaactagtccgaaggcccttggtgacttg
gtggagtcttatatgggtgccgtctttcttgacacggggctcaatttaaaccgtgtttgg
gagataatgttatctttgcttgatcctataattgatgtttccaagttgcggtataatcct
cttaaggaacttcgggagctttgccaattctatgactggaagctgcagtttccttcatcg
aagaaagatggtaaatactctgtcgaagcaaaagtcaatggaaatgacgtttctgcaact
gcttgcgccactaacatcagcagaaaagctgccaaaagaattgctgcccaacaagtattt
aaacacttgaagggtaaaggctacaaatcaaagtcgaaaccattggtggaattgcttaaa
aaatgtgaaaagaaggaagccaaattgattggatatgaagacatgttttcttttcttact
tctaaattcgatgagttgaagttgcatgaagctttcgaagttgtcaaatcaaaagtcagt
tctctcgatgaaatgccccaaataaattatgaaacctatcccataccaagtagacagcct
tctttttcgaacaaggcttctgagtgcaatcgtacactgaacattcaaattaatggctcc
aatgttgattcaccctccatctgtccaagtgctgactgcaatttggattcgcgggaaaca
ggtactttccacaatgggtcggcaaagtcacgtctctatgaagtatgtgttgctaactgc
tggaaaccgcccatttttcactgttgcaaagagacaggaccgagccacataaaagaattc
actttcaaggtggggatggaaattgatgaaatgccagacgagatatttgagttttatgga
gaacctcaggcgaagaagaaagatgcagctcacagtgcagcaaatggtgcactttggtac
ttgaaacacgagggatttttaaggtgtaaagactaa
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