Olea europaea var. sylvestris (wild olive): 111405096
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Entry
111405096 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111405096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111405096
03009 Ribosome biogenesis [BR:
oeu03009
]
111405096
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111405096
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111405096
Complex B
111405096
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111405096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
111405096
NCBI-ProteinID:
XP_022889583
LinkDB
All DBs
Position
12:complement(1331587..1337820)
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AA seq
537 aa
AA seq
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MHGSTLALLYHSSKIYITFRNLNQSCLQNPQIMSRYDSRSADPGSYRDRRTDSGFGGGSS
YRSSSSSSIKRDYEGSSEAPQRKLDLDGLTPFEKNFYVESPSVSAMSESEVEEYRRRREI
TVEGKDVPKPVKAFQDVGFPDYVMQEIVKAGFTEPTPIQAQGWPMALKGRDLIGIAETGS
GKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLAPTRELAVQIQQEATKFGASSRIKNTCIY
GGVPKGPQVRDLQKGVEVVIATPGRLIDMLESHHTNLRRVTYLVLDEADRMLDMGFEPQI
RKIINQIRPDRQTLYWSATWPKEVEHLARLFLFNPYKVIIGSEDLKANHAIRQLVEIVSE
NQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQVTRQLRMDGWPALSIHGDKSQAERDWVL
SEFKAGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF
FTVANARFAKELISILEEAGQKVSPELAAMGRGAPPPPGHGSFRDRGRGFGGGRSWN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtagcacgctagcactgctctaccattcttcaaaaatttacatcactttccgt
aatctcaatcagagttgcttgcagaacccacaaatcatgagccgctacgacagtcgctcc
gccgaccccggctcctatcgcgaccgccgaactgattcggggtttggtgggggctcaagt
tatcgttcgtcttcatcatcgtcaatcaaaagagattacgagggctcttcggaggcgcca
cagcggaaattggatttggatgggttgactccgtttgagaagaacttctacgtggagtcg
ccgtcagtttcggcaatgtctgagagtgaggttgaggagtataggcggcgacgggagatt
actgtcgaaggaaaggacgtacccaagccagtgaaggcttttcaggatgttgggtttcca
gattatgtcatgcaagaaattgtaaaagctggttttactgaacctacacccattcaagct
caaggttggcccatggctttgaaaggccgtgatcttattggtattgcagaaacggggtca
gggaagacacttgcctatctcttacctgcaattgtccatgttaatgctcaaccattttta
gctccgggagatggtccaatagttttagttttagccccaactcgtgaacttgctgttcag
attcagcaagaagctactaaatttggtgcatcgtcaaggattaagaacacgtgcatatat
ggtggggtcccaaaaggaccccaagttcgtgatctccagaaaggtgtcgaagttgtcatt
gcaacacctgggaggctgattgatatgttggagtctcatcatacaaacctgcgaagggtt
acatatcttgtgttggatgaggcggatcggatgctagatatgggttttgaacctcagatt
cgaaaaattattaatcagattcgcccagatcgccaaacattatattggagtgccacatgg
cccaaggaagttgaacatcttgcccgtctattcctttttaatccgtacaaagtgatcatt
ggttctgaagatttaaaagccaatcatgcaattcgccagcttgttgaaattgtttctgag
aaccaaaaatataataaattagtgaagttgttggaggacattatggacggtagccggatt
ttgatattcatggacaccaaaaagggctgtgatcaagtaactaggcagctccgtatggat
ggttggcctgcattatctattcatggagacaaaagtcaagcagaaagggattgggtcctc
tcagaatttaaggctggcaagagtcccataatgacggcaactgacgttgcagctagaggt
ctagatgtgaaggatgtgaaatatgtcatcaactatgacttcccgggatctctcgaggat
tatgttcatcgtattggtcgaacaggaagggctggtgccaaaggaacagcatacactttt
ttcacagttgcaaatgcccgatttgcaaaggaactcattagcatcctcgaggaggctgga
cagaaggtcagtcctgagcttgcagccatgggacgtggggcacctcctcctccaggtcat
ggaagtttccgagatcgtgggagaggttttggaggtgggcgttcttggaactga
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