Olea europaea var. sylvestris (wild olive): 111405098
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Entry
111405098 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111405098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111405098
03009 Ribosome biogenesis [BR:
oeu03009
]
111405098
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111405098
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111405098
Complex B
111405098
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111405098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
111405098
NCBI-ProteinID:
XP_022889586
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All DBs
Position
12:complement(1341217..1347511)
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AA seq
505 aa
AA seq
DB search
MSRYDSRSADPGSYRDRRTDSGFGGGSSYRSSSSSSIKRDYEGSSEAPQRKLDLDGLTPF
EKNFYVESPSVSAMSESEVEEYRRRREITVEGKDVPKPVKAFQDVGFPDYVMQEIVKAGF
TEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVLA
PTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEVVIATPGRLIDMLES
HHTNLRRVTYLVLDEADRMLDMGFEPQIRKIINQIRPDRQTLYWSATWPKEVEHLARLFL
FNPYKVIIGSEDLKANHAIRQLVEIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCDQ
VTRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVINY
DFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELISILEEAGQKVSPELAAMGR
GAPPPPGHGSFRDRGRGFGGGRSWN
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagtcgctccgccgaccccggctcctatcgcgaccgccgaactgat
tcggggtttggtgggggctcaagttatcgttcgtcttcatcatcgtcaatcaaaagagat
tacgagggctcttcggaggcgccacagcggaaattggatttggatgggttgactccgttt
gagaagaacttctacgtggagtcgccgtcagtttcggcaatgtctgagagtgaggttgag
gagtataggcggcgacgggagattactgtcgaaggaaaggacgtacccaagccagtgaag
gcttttcaggatgttgggtttccagattatgttatgcaagaaattgtaaaagctggtttt
actgaacctacacccattcaagctcaaggttggcccatggctttgaaaggccgtgatctt
attggtattgcagaaacggggtcagggaagacacttgcctatctcttacctgcaattgtc
catgttaatgctcaaccatttttagctccgggagatggtccaatagttttagttttagcc
ccaactcgtgaacttgctgttcagattcagcaagaagctactaaatttggtgcatcgtca
aggattaagaacacgtgcatatatggtggggtcccaaaaggaccccaagttcgtgatctc
cagaaaggtgtcgaagttgtcattgcaacacctgggaggctgattgatatgttggagtct
catcatacaaacctgcgaagggttacatatcttgtgttggatgaggcggatcggatgcta
gatatgggttttgaacctcagattcgaaaaattattaatcagattcgcccagatcgccaa
acattatattggagtgccacatggcccaaggaagttgaacatcttgcccgtctattcctt
tttaatccgtacaaagtgatcattggttctgaagatttaaaagccaatcatgcaattcgc
cagcttgttgaaattgtttctgagaaccaaaaatataataaattagtgaagttgttggag
gacattatggacggtagccggattttgatattcatggacaccaaaaagggctgtgatcaa
gtaactaggcagctccgtatggatggttggcctgcattatctattcatggagacaaaagt
caagcagaaagggattgggtcctctcagaatttaaggctggcaagagtcccataatgacg
gcaactgacgttgcagctagaggtctagatgtgaaggatgtgaaatatgtcatcaactat
gacttcccgggatctctcgaggattatgttcatcgtattggtcgaacaggaagggctggt
gccaaaggaacagcatacacttttttcacagttgcaaatgcccgatttgcaaaggaactc
attagcatcctcgaggaggctggacagaaggtcagtcctgagcttgcagccatgggacgt
ggggcacctcctcctccaggtcatggaagtttccgagatcgtgggagaggttttggaggt
gggcgttcttggaactga
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