Olea europaea var. sylvestris (wild olive): 111405339
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Entry
111405339 CDS
T05244
Name
(RefSeq) protein SHOOT GRAVITROPISM 5-like
KO
K25871
zinc finger protein IDD14/15/16
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oeu03000
]
111405339
Transcription factors [BR:
oeu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
111405339
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GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
C2CH-4th_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_4
zf-met
zf-MYST
zf-FCS
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
111405339
NCBI-ProteinID:
XP_022889934
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Position
12:complement(5655271..5657779)
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AA seq
423 aa
AA seq
DB search
MLSSNNPSSFSEPFASSENENNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQ
GFQRDQNLQMHRRRHKVPWKLLKRETPIAKKRVFVCPEPSCLHHDPCHALGDLVGIKKHF
RRKHSNHKQWVCEKCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDSCSM
GRLRSEAHNNLQPAACLSRTASSPSPSSDTNVTPIFSAPLSLPNPKMDTNFLRPAGDSSQ
NFKNSRLPNLELQLLTKMDENQSTQLQLSIGSSEISEKTEMDNANMCSSEKPNMAAAVPP
SRRLKEQAEEQFRLAMAEKAYAEDARQQAKRQIELAEQEFANAKGIRQQARAELEKALAL
KQHAINQNNSTTLQVTCHACKQQFQASRSVTETLSANGNSLGLSYISSCSRERGIKKGDH
SDK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttaagcagcaataatccctcttctttttccgagccatttgcatcctcggaaaatgaa
aacaatagtaaacggaaaagaaggcctgcaggaaccccagatccagatgcagaagttgta
tctctttcaccgaaaaccctattggaatcagatcgatatgtatgtgagatctgcaatcaa
gggttccaaagagatcaaaatttacagatgcatagaagaagacataaggtaccttggaaa
ctgctaaaaagggagacaccaatagcaaagaagagagtattcgtgtgccctgagcctagc
tgtttgcatcatgatccttgccatgctttaggtgatcttgtgggaatcaaaaaacatttc
agaagaaaacacagtaatcataaacagtgggtttgtgagaaatgttcaaagggatatgca
gttcaatcagattacaaggcacatctcaaaacttgtggaactagaggacattcttgtgac
tgtggccgtgtcttctcaagggtggagagtttcattgaacaccaagattcttgcagcatg
gggcgcctcagatcagaagcacacaataatttacagcctgcagcttgtttatctcgaaca
gcctcaagccctagtccctctagtgacaccaatgttaccccaatattttctgcaccactc
tctttaccaaatccaaaaatggacaccaatttcttgagacctgcaggtgattctagtcaa
aatttcaagaattccaggctacccaatttagagctccagctcttaaccaaaatggatgaa
aatcagtcaactcaacttcaactctctattgggtcatcagaaatcagtgaaaaaaccgaa
atggataatgcaaatatgtgcagtagtgagaagccaaacatggctgcagcagtgccacca
tcgagacgactaaaagaacaggcggaggaacagtttaggttagccatggctgaaaaggct
tatgcagaagatgcaagacaacaggccaagcgacagattgaattggcagaacaagaattt
gccaatgcaaaaggaatcagacaacaagcacgagcagaactagagaaagcactggccttg
aaacaacatgctataaatcaaaacaattcaactacgttacaagttacttgccatgcttgt
aagcagcagtttcaagcttcacgttcagtgacagaaacactgtccgccaacggaaattca
ctgggattgagttacatatcatcgtgttcaagagaaaggggtatcaagaaaggtgatcat
agtgataagtga
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