Olea europaea var. sylvestris (wild olive): 111405405
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Entry
111405405 CDS
T05244
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03013
Nucleocytoplasmic transport
oeu03015
mRNA surveillance pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111405405
09122 Translation
03013 Nucleocytoplasmic transport
111405405
03015 mRNA surveillance pathway
111405405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111405405
03041 Spliceosome [BR:
oeu03041
]
111405405
03009 Ribosome biogenesis [BR:
oeu03009
]
111405405
03012 Translation factors [BR:
oeu03012
]
111405405
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111405405
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111405405
mRNA cycle factors
Stress granule specific factors
111405405
Spliceosome [BR:
oeu03041
]
Complex C
Other components
EJC/TREX
111405405
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
90S particles
Helicases
111405405
Translation factors [BR:
oeu03012
]
Eukaryotic type
Initiation factors
eIF-4
111405405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Cas3-like_C_2
Helicase_RecD
PhoH
TniB
CMS1
Motif
Other DBs
NCBI-GeneID:
111405405
NCBI-ProteinID:
XP_022890036
LinkDB
All DBs
Position
12:complement(6853792..6886136)
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAGTSQRARRAMEEEDAKLVFETSKGVEPIMSFDEMGIKDDLLRGIYNYGFEKPSAIQ
QRAVLPIISGRDVIAQAQSGTGKTSMIALAVCQIADTKSSEVQALILSPTRELAAQTEKV
ILAIGDYINIQAHACIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTRSIKLLI
LDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPNEILEITSKFMTDPVRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTAKMRENNFTVS
SMHGDMPQKERDAIMAEFRSGQTRVLITTDVWAWGLDVQQAFLVINYDLPNNRELYIHRI
GLSSSFGRKGVAINFVKSDDIKILRVIEQYYSTQINEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcagggacttctcagagggcacggcgggcaatggaggaggaagacgcgaag
ctggttttcgagacatcaaaaggggtggagccaataatgagtttcgacgagatgggtatc
aaagacgacctccttagaggaatttacaactacggctttgaaaagccctccgccatccag
cagcgggccgttctccctattatctccggccgtgacgtcattgcccaggcccagtctggt
actggtaaaacatccatgattgctcttgcggtctgtcagattgccgacaccaagtcctcc
gaggtccaggccttaatattgtcacctacaagggagctggctgctcaaacagagaaagta
atattggccattggtgactatataaacattcaggctcatgcatgcattgggggcaaaagt
gtgggtgaggatattagaaaactggagcatggagttcatgtggtgtcggggaccccaggc
agagtttgtgacatgatcaagaggagaactctgagaactagatccatcaaattattaatt
ctcgatgaatctgatgaaatgttgagccgtggattcaaggatcagatttatgatgtttac
agatatcttccaccagagcttcaggttgtcttgatttctgccactcttcctaatgagatc
ctagagattacgagcaaattcatgacagatcctgtccgtatcctcgtaaaacgtgatgaa
ttgacactggagggcattaagcaattttttgtggcagtagaaagagaagaatggaagttt
gatactctatgcgatctatatgatactcttacaatcactcaggctgtaatcttttgcaac
acaaagcgtaaggtggattggctaacagcaaaaatgcgcgagaataactttactgtctca
tccatgcatggggacatgccacagaaagagcgggatgcaattatggcagaatttaggtct
ggtcagactcgggttcttatcaccacagatgtttgggcttgggggttggatgttcaacag
gctttcctggtgatcaattatgacctgcccaacaatagggagctttacattcatcgtatt
ggactatctagcagtttcgggagaaaaggcgttgcaatcaactttgttaaaagtgatgat
atcaaaatcttacgagttatagagcagtactacagtacccagataaatgaaatgcctatg
aatgtggcagatctaatttga
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