Olea europaea var. sylvestris (wild olive): 111405581
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Entry
111405581 CDS
T05244
Name
(RefSeq) WD repeat-containing protein RUP2-like
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04120
Ubiquitin mediated proteolysis
oeu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111405581
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111405581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oeu04121
]
111405581
Enzymes [BR:
oeu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111405581
Ubiquitin system [BR:
oeu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111405581
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
111405581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_DCAF4
WD40_like
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_TEP1_C
Beta-prop_NOL10_N
Beta-prop_RIG_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
111405581
NCBI-ProteinID:
XP_022890297
LinkDB
All DBs
Position
12:complement(10698334..10699825)
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AA seq
408 aa
AA seq
DB search
MKNFSSHFLHQNQEEPNKEIPETGQGFGKEGKQQEEERSRCEWEFNLSTVVSSSAINGGV
VSDTLGVIEFDPSDSFLATGGKARKIRIYSVKSLLPCEEISKINGVTLLDHATACDYYIC
TPAKLSSLRWKPGSGGRFLGSGDYDGVVMEYDLERRVPVFERDEHGGRRVWSMDYSHRDP
ILGASGSDDGTMQMWDPRCGDGGKCLAAVQPNTTAPSPVCCVEFNPFGGALVVVGCADSK
VYGYDIRRMADPLFVFDGHQKAVTYIKFLDFQTIITSAVDGCLKMWNSENNQIIRTYKGH
TNSRRFVGLSVWRGGGLLCCGSENNQVFVYDKRWGEPIWVQSFEPMDAAATGDGGDGGGG
GGQGYDRSFVSSVSWRQTWDDRCTLVAAGGSDGILKVFECIKKKETQY
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttttcttcccattttctgcatcaaaaccaagaagaacccaacaaagaaatc
ccagaaacaggacaaggattcggaaaagaaggaaagcaacaagaggaagaaagatccagg
tgtgagtgggaattcaatctttcaaccgtagtttcttcctccgctattaatggaggagtt
gtttctgatacacttggcgttatagaattcgaccccagtgatagttttttagccactggt
ggaaaagcaagaaagattcgaatttacagtgtgaaatcccttttgccatgtgaagagatt
tcaaaaattaacggtgtaacattgctggatcatgctactgcgtgtgattattatatatgt
actcctgcgaagctcagcagcctgcggtggaagcccggttctggtgggcggttcctggga
tcgggtgattacgacggtgttgtgatggaatatgatcttgagagaagagtgcctgttttt
gagagggatgagcatggcgggagacgggtatggagcatggactattcgcatcgggatccc
attttgggtgcatccgggtcggatgatggcaccatgcagatgtgggacccacgttgtggc
gacggagggaagtgcttggcggcagtgcaaccgaataccaccgcgcccagcccagtttgt
tgtgtagaattcaatccgttcggcggcgcattggtggtggtgggttgtgcagatagcaaa
gtctacggctatgatataagaagaatggctgaccccttgtttgtatttgatgggcaccaa
aaggcagtaacatacattaaatttcttgattttcagactattataacttccgccgttgat
ggctgcttgaagatgtggaattctgaaaataatcagattatccgaacgtacaaaggccac
acaaacagcagaagatttgtgggtttatcagtttggaggggtggaggattattatgttgt
ggctcagaaaataatcaagtttttgtgtatgacaaaagatggggtgagcccatatgggtt
cagagttttgaaccgatggatgcagctgccacaggcgatggcggtgacggtggcggtggc
ggtggacaaggatatgaccggagttttgttagcagcgttagctggcgacaaacctgggac
gaccgctgcacactggtggctgcagggggttcagatgggattttaaaagtatttgaatgc
ataaaaaaaaaggagacgcagtattaa
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