Olea europaea var. sylvestris (wild olive): 111406264
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Entry
111406264 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111406264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111406264
03009 Ribosome biogenesis [BR:
oeu03009
]
111406264
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111406264
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111406264
Complex B
111406264
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111406264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
111406264
NCBI-ProteinID:
XP_022891357
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All DBs
Position
12:27693982..27705903
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AA seq
506 aa
AA seq
DB search
MSRYDSRSADPGSYRDRRTDSGFGGGSSYRSSSSSSIKRDHEGPSEAPQRKLDMDGLTPS
FEKNFYVESPSVATMSESEVEEYRLRREITVEGKDVPKPVKAFQDVGFPDYVMQEVVKAG
FTEPTPIQAQGWPMAMKGRDLIGIAETGSGKTLAYLLPAIVHVNAQPFLAPGDGPIVLVL
APTRELAVQIQQEATKFGASSRIKNTCIYGGVPKGPQVRDLQKGVEVVIATPGRLIDMLE
SHHTNLRRVTYLVLDEADRMLDMGFEPQIRKIINQIRPDRQTLYWSATWPKEVEQLARQF
LFNPYKVIIGSADLKANHAIRQHVEIVSENQKYNKLVKLLEDIMDGSRILIFMDTKKGCD
QVTRQLRMDGWPALSIHGDKSQAERDWVLSEFKAGKSPIMTATDVAARGLDVKDVKYVIN
YDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELISILEEAGQKVSPELAAMG
RGAPPSSGHGSFRDRGRGFGSGRSWN
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctacgacagtcgctccgcagaccccggttcctaccgcgaccgccgaactgat
tcgggttttggtgggggctcgagttatcgttcgtcttcatcatcctcgattaaaagagat
cacgagggcccttcggaggcgccacagcggaaattggatatggatgggttgactccatca
tttgagaagaacttttatgtggagtcgccgtcagttgcaacaatgtccgagagtgaggtg
gaggagtataggctgcgtcgagagattactgtcgaaggaaaggatgtgcccaagccagtg
aaggcttttcaggatgttgggtttccagattatgttatgcaagaagttgtaaaagctggt
tttactgaacctacacctattcaagctcaaggttggcccatggctatgaaaggccgtgat
cttatcggtattgcagaaacggggtcaggaaagacacttgcctatctcttacctgcaatt
gtccatgttaatgctcaaccatttttagctccgggagatggtcccatagttttagtttta
gcccccactcgtgaacttgctgttcagattcagcaagaagctactaaatttggtgcatcg
tcaaggattaagaatacgtgcatatacggcggggtcccaaaaggaccccaagttcgtgat
ctccagaaaggtgtcgaagttgtcattgcgacacctgggaggctaattgatatgttggag
tctcatcatacaaacctgcgaagggttacatatcttgtgttggatgaggcggatcggatg
ctagatatgggctttgaacctcagattcgaaaaattattaatcagattcgaccagatcgt
caaacgttatattggagtgctacatggcccaaggaggttgaacaacttgcccgacagttc
ctttttaatccatataaagtgattattggttctgcagatttaaaggccaatcacgcaatt
cgccagcatgttgaaattgtttccgagaaccaaaaatataataaattagtgaagttgttg
gaggacattatggatggtagccggattttgatattcatggacaccaaaaagggctgtgat
caagtaactaggcagcttcgtatggatggttggcctgcactatctattcatggagacaaa
agtcaagcagaaagggattgggtcctctcagaatttaaagctggcaagagtcccataatg
acagctactgatgttgcagctcggggtctagatgtgaaggatgtgaaatatgtcatcaac
tatgatttccctggatctctcgaggattatgttcatcgtatcggtcgaacaggaagggct
ggtgccaaaggaacggcatacacctttttcacggttgcaaatgcccgatttgcaaaggaa
ctcattagcatcctcgaggaggctggacagaaggttagtccggagcttgcagccatggga
cgtggtgcacctccatcctcaggtcacggaagtttccgagatcgtgggagaggtttcggc
agtggacgttcttggaactga
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