Olea europaea var. sylvestris (wild olive): 111406626
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Entry
111406626 CDS
T05244
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111406626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111406626
Enzymes [BR:
oeu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
111406626
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
111406626
Prokaryotic type
111406626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
SR-25
LED_rpt
Ebp1_C
Motif
Other DBs
NCBI-GeneID:
111406626
NCBI-ProteinID:
XP_022891786
LinkDB
All DBs
Position
1:27002978..27007256
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AA seq
245 aa
AA seq
DB search
MKGCPSSSSRTLMDLFKQPAAKRLKRHSSPPLSPSSSSSKDASSLSASTLTSEERLKMEF
NKALAKSKRNLKRCSDVVSKSTSKGYNDPYHGPGQAMGLSFSVPNGVKVPSSLVNIYKEL
QQDLGCSIPSSGNLEKWAVQGVLLLNAVLTVRQYQANSHAKKGWELFTDAVIETISQKKR
GVIFLLWGNYAQAKARLVDETKHHVLKAVHPSGLSANRGFFGCRHFSRTNQLLEKMGTSP
IDWQL
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggtgtccatcttcttcctcaagaaccctaatggacctgtttaaacaaccagca
gcaaaacgtcttaagagacactcttctcctcccctttcaccgtcgtcttcatcatcaaag
gatgcctcttcattgtcggcctcaaccctcacctccgaggagagattaaaaatggaattc
aacaaagcccttgccaaatccaagaggaaccttaaacgctgctcagatgtagtctctaaa
tccacttccaaaggttataatgacccataccatggacctggtcaggcaatgggtctctct
ttctctgtacccaatggcgtaaaggtcccttcaagtcttgtaaacatttacaaggaactt
caacaagatttgggctgttcaattccctcaagtgggaatctggaaaaatgggctgtacag
ggagttctcttgctaaatgctgtactcaccgttaggcaatatcaggcaaattcacatgca
aaaaagggatgggaactattcactgatgctgtcattgaaacaatttcacagaagaaaaga
ggagttatttttcttctttggggaaactatgcccaagcaaaagccaggttggtcgatgag
acaaagcaccatgttctcaaagcagtacatccttccggtttatctgcaaacaggggcttc
tttggatgcaggcatttttctcgtacaaaccagctgttggagaaaatggggacctctcct
atagattggcaactataa
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