Olea europaea var. sylvestris (wild olive): 111407814
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Entry
111407814 CDS
T05244
Name
(RefSeq) transcription initiation factor TFIID subunit 15b-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015
mRNA surveillance pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111407814
09122 Translation
03015 mRNA surveillance pathway
111407814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111407814
Spliceosome [BR:
oeu03041
]
Complex A
Other components
Complex A specific factors
111407814
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GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
111407814
NCBI-ProteinID:
XP_022893264
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All DBs
Position
13:19650466..19656349
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AA seq
431 aa
AA seq
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MSGAYGYEGDGSAPPPMGGGGYGGYGGGSSGGGGGYGNYGSGGGGGGYGGNRGGGRGGGG
GGYGGGGGGYQGDRGGRGGGGGGARGGGRGGGSGRDGDWRCPNPGCGNLNFARRVECNKC
GAPSPAGSDDRGSRGDGGGNTRGGRGGNYYDGGSGRGGNDYDGRNSRGGSYGGSQGRDGG
YGKDAPVAPASHNGAGNNYPPPPHAYGGSPNYAPDSVPPPASYTGGPASYPPSYATPAGY
GGDPRNDSRGGGRGGPPGGYGGDFRNSAGGYGGAPTEAPIAVKQCDENCGDSCDNARIYI
SNLPPDVTTDELRDLFGSIGQVARIKQKRGYKDQWPWSIKIYTDEHGTSKGDAVLSYEDP
SAAHSAGGFFNMHELRGHKISVTMAEKSAPKGPPYGSGGGGRGGYGGDKRRDGGGSGPNR
NYHGGNRSRPY
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtgcgtacggttacgaaggagatggatctgctccgccgcccatgggtggggga
ggctacggaggatatggcggaggaagtagtggtggcggcggtggatatggtaattatgga
agtggcggaggcggaggaggctatggtggtaatagaggcggcggaaggggaggtggaggt
gggggatacggaggaggtggtggtggataccaaggagatcgagggggacgcggcggcgga
ggaggcggagccagaggtggtggtcgtggcggtggaagtggcagggatggcgattggcga
tgccctaatccagggtgtgggaatttgaattttgctcgaagagttgagtgtaacaaatgt
ggtgcaccgtctcctgctggatctgatgatcgtgggagtagaggtgatggtggtggaaat
actcgaggtggtagaggtggtaactattatgatggtggaagtggcagaggtggtaatgat
tatgatggaagaaatagtagaggtggttcttatggtggtagtcaaggcagagatggtggt
tatgggaaggatgctccagttgctcctgcatctcacaatggagcgggtaataactacccc
ccacctcctcatgcatatggcgggagccctaattatgctcctgattcagttcctcctcct
gcaagctatactggtggccctgcttcttatcctccatcatatgctactcctgctggatat
ggtggtgatccacgtaatgatagccggggtggcggacgaggtggccctcctggtgggtat
gggggagattttcgaaactcagcaggaggttatggtggtgctccaacagaggctccaatt
gcagtcaagcagtgtgatgaaaattgtggtgactcctgtgacaatgctagaatctatatc
tcgaatttacctccagatgtgaccacggacgagcttagagatctttttggaagtattgga
caagtagcaagaatcaagcaaaagcgaggctacaaggaccagtggccctggagtataaaa
atatacacagatgaacatggaaccagcaaaggagatgcagttttgtcatatgaagatcca
tctgctgcacattcagctggtggttttttcaacatgcatgaacttagaggtcacaaaatt
agtgtcacaatggctgagaaatccgctccaaagggtcctccatatggttctgggggcggt
ggtagaggtggctatggaggtgacaaacgtagagacggtggcggttcaggtccaaatagg
aactatcatggtggaaaccgctcacgtccatactaa
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