Olea europaea var. sylvestris (wild olive): 111408021
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Entry
111408021 CDS
T05244
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17 isoform X1
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oeu01009
]
111408021
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oeu03009
]
111408021
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111408021
Protein phosphatases and associated proteins [BR:
oeu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111408021
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111408021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SLFN-g3_helicase
HerA_C
Motif
Other DBs
NCBI-GeneID:
111408021
NCBI-ProteinID:
XP_022893531
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All DBs
Position
13:complement(25371556..25385494)
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AA seq
596 aa
AA seq
DB search
MKQNTMNNVKSKPDGKKNSEVFASCSFSSLGLHPTLCDQLKERLSFEGPTQVQAEAIPVV
LSGRHLLVNAATGTGKTVAYLAPVIHQLQNINPRIQRSDGTFALVLVPTHELCMQVYEIL
VKLLHRFHWIVPGYIMGGENRSKEKARLRKGVSILVATPGRLLDHLKNTSSFLHTNLRWI
IFDEADRILELGFGKDIEQILNILGTKQDKSVSKENATSKIPEVLKQNLLLSATLNEKVN
HLAKISLENPVMIGLDEKKMQHNVNHDHAVSVGSDVFDRLGESAKGMTASTEEYNLPSQL
VQRYIKVPCGSRLVVLLSILKHLFERETSQKIVVFFSTCDAVDFHYSLISKFHWPPRLQS
EAEVQKMFLGCKTLRLHGNMNHEDRKTTFQTFKTEKSALLLSTDVSARGLDFPKVRCIIQ
YDSPGEATEFVHRVGRTARLGEKGESLIFLQPVEIDYLKDLEKHGVMLTEYPLLKLLDSF
PLHGLKLPIKKLLSVEMHPWVLSLQKALESLISTESTLKNLAKDAFRSWVRAYTAHRGEL
KQIFMVKKLHLGHVAKSFALKEQPSVVNKSFQKQIKKRRRDEKHRVHFKKRRVAKS
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaacactatgaataatgtaaagagcaaaccagacggcaaaaagaattccgaa
gttttcgcgtcatgttctttctctagccttggccttcatcccaccttatgcgatcagctc
aaagagaggttgagtttcgagggtccaacacaggttcaggctgaggcaattcctgttgtg
ctatccggccggcacttgcttgttaatgctgcgactggaactgggaaaacggtggcgtat
ttagctccagttattcatcaattgcagaatattaatccacgaattcagcggtctgatggt
acttttgcgttggtccttgtaccaacgcatgaactatgcatgcaggtgtatgaaattttg
gtgaagttgttacatcgttttcattggattgttcctggctacatcatgggtggggaaaac
aggtcaaaggagaaggccaggttaaggaaaggtgtatcaatcctcgttgcaactcctgga
cgtcttttggatcacttgaaaaatacttcatcatttctgcacacaaatctccgctggatt
atatttgatgaagcagataggattctagaactagggtttggtaaagacatagaacagata
cttaatattttgggcacaaaacaagacaaatctgttagcaaggagaatgcaacatcaaaa
attccagaagttctgaaacagaatttgctgttgtcagctactttaaatgaaaaagtaaat
catcttgctaaaataagtttagaaaacccagtaatgattggtctagatgagaagaagatg
caacataatgtaaatcacgatcatgcggtgtctgtcggatctgatgtgtttgatagatta
ggggaatctgcaaaaggaatgactgcttcaactgaggaatataatcttccatctcagtta
gttcagagatacattaaagttccatgtggatctcggcttgttgtgctcctttccatatta
aagcatctatttgagagagaaacttcccagaagattgttgtattcttttcaacgtgtgat
gcagttgatttccattattcattgataagtaaatttcattggccacctagattgcaatca
gaagcagaagtccaaaaaatgtttttgggatgcaaaactttgcgattgcacgggaatatg
aatcacgaggatcgtaaaactacattccagacattcaaaactgaaaaatcagcgcttctg
ttatccacagatgtttctgctagaggattagactttcccaaagtccgatgcattatacaa
tatgattctccaggagaggcaactgagtttgtacacagggttggaagaactgcccggttg
ggtgaaaagggagagtctctcatattcctacaaccagttgaaattgattacttgaaggac
ctggaaaagcatggggtaatgctgacagagtatcctcttctaaaactgctggatagtttt
ccgttgcacggtctcaagctcccaatcaaaaagttattgtcagtagagatgcatccatgg
gtgctttctttgcagaaagcattagaatcccttatttcaacagagtcaacgttgaaaaat
ttggccaaggatgcatttcgctcttgggtgcgtgcatacactgctcatcgtggtgagctg
aagcaaattttcatggtgaagaaacttcacctggggcatgttgcaaagagttttgcattg
aaagagcaaccttcagtagttaacaagtcattccagaagcaaataaaaaagaggaggaga
gatgagaagcacagagtacatttcaagaagagaagggttgctaaatcttga
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