Olea europaea var. sylvestris (wild olive): 111408746
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Entry
111408746 CDS
T05244
Name
(RefSeq) small RNA degrading nuclease 1-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111408746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oeu03009
]
111408746
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
RNases
111408746
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DEDDh_C
RNase_3_N
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
111408746
NCBI-ProteinID:
XP_022894279
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All DBs
Position
2:2912647..2919556
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AA seq
488 aa
AA seq
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MDEMIVSAKKEVLIEMVKLAQKRGMVGSKGGWKDFLKFYDKKFGTSLSDPARRSVGSLAA
FLKTFSQENDLKFFNKVLQCHSNHEAVEKFKTIFADNETPEQKLVSLTLRHPQYPSDYSL
PSYDDDWLIVKCSKKSKVMKSTIMVAIDCEMVLCEDGTEALVRVCAVDRNLQVKLDAFVN
PNKAIADYRTEITGISAKDLDGVTCSLADVQKSMKKLLSHGTILVGHSLSNDLQALKLEY
TRVIDTSYVFKYANRPANKKPSLSSLCKAVLGYELRKEGSPHNCLDDACAAMKLVLARFE
QSANGVISEEVKDVDTAKLLLHRIPINISTKDLKIVIPGNFEIEVKTGKKVRDLYSAFAI
FENQQKANETFDNLQGDLEKDSSGRPQKCFTFELSTGTPASFYVCKMARDDSVSQFTATN
KRSLEDENNLSTKKSRKDQICEQPEELDSSSNLSEEIGRLKQELRQRDEEISNLNKIIVA
LARKQGLL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgattgtctcagcgaaaaaagaggtgcttattgaaatggtgaaattggca
caaaagcgaggaatggtgggtagtaaaggaggctggaaagattttttaaaattttatgac
aagaagtttggcacaagcttgagtgaccctgctcgaaggtctgttgggtcattggcggca
tttttgaaaacttttagccaagagaatgatttgaagtttttcaataaagtgttgcagtgt
cactcgaaccatgaagctgtggagaaatttaaaacgatttttgcagataatgaaacaccc
gaacagaagctggtcagtttgactctaaggcatcctcagtacccaagtgattactctttg
ccatcatacgatgatgactggttgattgtgaagtgcagtaaaaagtccaaggtgatgaag
tcaacaataatggttgccattgattgtgagatggttctctgtgaagatggcaccgaagct
ttagtgagggtgtgtgctgtggaccgcaatttacaggttaaacttgatgcatttgtgaac
cccaataaagctattgcagattaccgtacggagataactggaatctctgcaaaagattta
gatggagtaacttgttcattggcagatgtacagaaatcaatgaagaagttattatcacat
ggaacaattttagttggccacagtctaagcaatgatcttcaagcactgaagttagagtac
actagagtaattgacacatcttacgttttcaaatatgcaaatagacctgctaacaaaaag
ccttccttgagttcattgtgcaaggctgttttaggttatgagcttcggaaagaggggagt
ccacataactgtctagatgatgcctgtgctgcaatgaaacttgttctagctagatttgaa
caatcagctaatggtgttatttccgaggaggtgaaagatgtagatacagccaagctgctg
cttcacaggattccaattaatatttctactaaagatttaaagattgttattcctggaaac
tttgagattgaagtaaagacaggcaaaaaagttcgagatctatattctgcctttgcaatt
tttgaaaatcagcaaaaggccaatgaaacatttgataatcttcagggcgatctagagaag
gactcctctggacgacctcagaaatgcttcaccttcgagctcagtacagggacaccggcc
agtttttatgtttgcaagatggctcgtgatgattctgttagtcaatttacagcaacgaat
aagaggtccttagaagatgagaacaacttgagcacaaagaagtcaaggaaagaccagata
tgtgaacagcctgaggagctggattcaagttcaaatctatcggaagagatcggaagattg
aagcaagagcttagacaaagagacgaggaaatatcaaacttgaacaaaataatagtcgca
cttgctaggaaacaaggattactctga
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