KEGG   Olea europaea var. sylvestris (wild olive): 111408795
Entry
111408795         CDS       T05244                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:oeu03009]
    111408795
Ribosome biogenesis [BR:oeu03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    111408795
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st NBCH_WD40 WDR55 EIF3I Beta-prop_EML Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IP5PC_F WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_VPS8 WDR54 Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_LRRK2 Beta-prop_WDR19_1st Beta-prop_DCAF12 Beta-prop_BBS7 Nucleoporin_N
Other DBs
NCBI-GeneID: 111408795
NCBI-ProteinID: XP_022894335
LinkDB
Position
14:complement(3111896..3118285)
AA seq 451 aa
METELVIASSPTDAGISCWNLHTGSEHLRYKMCSSPAHGLASVAGRFLASSQIRDPKSSS
SGSILYWSWNKPQVEVKSFPAEPVKPLLSNSEGTYIVGGGISGDIYLWEVATGNLLKKWH
AHYRGVTCMVFNDDQSLLISGSEDGCVRVWSLFMIFGGANREKAKNPYEYSFHEHTLKVT
DIKIGYGGCNAIIVSASEDRTCKVWSLSTGKLLRNIVFPSIIDAIALDPGEHVFYAGGRD
GKIYIAALNAPGTSNSSYGLHIIGSLSEHSKAITCLASSADGSLLVSGSEDGMIRVWDTK
RRNITRVFRHAKGPVNNVLVVRQPQHLNPGTSPNTQASSLRGHGWPMPPPLQKYANSSDE
NAYTKAFISPQTASNKLLDDSYISVQTMENLIKELQKQGSAAAAELDVERLKVEQQRSVQ
TIQQWKTIYENLHQFCVSELLDGNHVESNNG
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggaaaccgaattggtgatagcctcatcgccgacggacgccggcatcagctgctggaat
ctccacacgggatccgagcacctgcgctacaagatgtgctcctcccctgcccacggtctc
gcctctgtcgctggccgcttcctggcctcctcccaaatccgggaccccaagtcctcctct
tccggctctatcctctactggtcctggaacaagcctcaggttgaagtcaagagcttccct
gctgaacccgtaaagccacttctctcgaatagtgaaggaacttatattgtgggaggaggt
atttcaggcgatatatacttatgggaggttgctactgggaatttgcttaaaaagtggcat
gcacattacaggggagttacttgcatggtatttaatgatgatcagtcccttttgatttca
gggtcagaggatggatgtgttcgagtttggtcacttttcatgatctttggtggtgcaaat
agggagaaagcaaagaatccttatgagtatagtttccacgagcatactttgaaagtgaca
gacattaaaattgggtacggtggatgtaatgcaattattgtgtctgcttctgaggatcgt
acttgcaaggtatggagtttatctacaggaaaacttttaagaaacattgtcttcccctca
ataattgatgcaattgcattggaccctggggagcatgtcttttatgctggaggtagagat
ggtaagatatacattgctgcattaaatgctccaggaacctccaacagcagttacgggtta
catatcattggttcattatctgagcacagtaaggctattacctgcttagcttctagtgct
gatggctctctattggtttctggttctgaggatggcatgattcgagtttgggacactaaa
agacgcaacattactcgtgtctttagacatgccaaaggtcctgtcaacaatgttcttgtt
gttagacagccacagcatttaaatcctggaacatctccaaatacccaagcttcctcatta
aggggacatggttggccaatgccgccaccactgcaaaaatatgccaattcatcagatgag
aatgcctatactaaagcattcataagtcctcagactgcttcaaacaaactcttagatgat
tcatacatcagtgtccaaacgatggagaatctaattaaggaactgcagaagcaaggttct
gctgctgctgctgaactggatgttgagaggctaaaagttgaacagcaaagatctgtgcaa
acgatccagcagtggaagacaatatatgaaaatctgcatcagttctgtgtgagtgagctt
ttagatggtaatcatgttgaaagtaacaatggttga

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