KEGG   Olea europaea var. sylvestris (wild olive): 111409312
Entry
111409312         CDS       T05244                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1 isoform X1
  KO
K14962  COMPASS component SWD2
Organism
oeu  Olea europaea var. sylvestris (wild olive)
Pathway
oeu03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oeu00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111409312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oeu03019]
    111409312
   03036 Chromosome and associated proteins [BR:oeu03036]
    111409312
Messenger RNA biogenesis [BR:oeu03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111409312
Chromosome and associated proteins [BR:oeu03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     111409312
    COMPASS/SET1 complex (yeast)
     111409312
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40_WDHD1_1st WD40_Prp19 WD40 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 NBCH_WD40 Beta-prop_NWD2_C RMC1_N WD_LRWD1 PQQ
Other DBs
NCBI-GeneID: 111409312
NCBI-ProteinID: XP_022895114
LinkDB
Position
14:complement(15891945..15899239)
AA seq 342 aa
MTSLSELNDDIVRSMSIGAVFSDFGGKINSIDFHRTADLLVTASDDNSVRLYDIMSAKLL
KTTYHTKHGADRICFTHHQSSVICSSRHNLDSDGEILRYLSMYDNRCLRYFKGHKERVVS
LCMSPVNDSFMSGSLDHSIRIWDVRVNACQGILHLRGRPTVAYDQQGLVFAVAMEGGAIK
LFDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSMLLTTTNNNIYILDAYAGEKKCGFS
VDPSSETTIEATFTPDGQYVVSGSGDGNLHAWRIDTPDKVASWDSYIGVASCLKWAPRRV
MFAAASSVLTFWIPNNSKTTAELGTLHPEMGVQPEQITQMKS
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgacttcactttcagaactcaacgacgatatagttcgtagcatgtcaatcggagccgtc
ttctcggatttcggtggaaaaattaattccattgattttcataggactgctgatttatta
gtaacagctagtgacgacaattcagtgcgactttatgacatcatgagtgccaagttgctg
aaaacaacttatcacacgaagcatggagctgataggatatgctttactcaccaccaaagt
tctgttatttgttcttcaaggcacaatttggattctgatggagaaatattgcggtatcta
tctatgtatgacaataggtgccttcgttactttaagggtcacaaagagagggttgtgtct
ctctgcatgtctccagtcaatgacagcttcatgtctggttcacttgaccatagcatccgg
atatgggatgttcgcgtaaatgcctgtcagggaattttacatctacgaggtaggcctact
gttgcttatgatcaacaaggccttgtctttgctgtggctatggaaggaggtgccatcaaa
ttatttgattctagatcatacgacaagggtccctttgatacttttctagttggtggagat
accgccgaggtcagtgatattaaattcagcaatgatggtaaatcaatgcttttgacaaca
acaaacaacaatatttacatcctcgatgcatatgcaggagagaagaaatgtgggtttagt
gtggatccttcatcagaaacgacaatagaggcaacgtttacccctgatggtcaatatgtg
gtttctggttctggggatggaaatttgcatgcatggagaatcgatacaccagacaaggtg
gcatcctgggatagctacataggtgtcgcatcttgcctaaaatgggcacctcgtagagtc
atgttcgctgctgcatcttcggtactcaccttttggataccgaacaacagcaagacaact
gcagaacttggaactttgcatcccgaaatgggagttcaacccgagcaaattactcaaatg
aaatcttag

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