Olea europaea var. sylvestris (wild olive): 111409322
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Entry
111409322 CDS
T05244
Name
(RefSeq) ATP-dependent RNA helicase-like protein DB10
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111409322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oeu03041
]
111409322
03009 Ribosome biogenesis [BR:
oeu03009
]
111409322
Enzymes [BR:
oeu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111409322
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
U1 related factors
111409322
Complex B
111409322
Ribosome biogenesis [BR:
oeu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111409322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111409322
NCBI-ProteinID:
XP_022895132
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All DBs
Position
14:complement(16223559..16230377)
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AA seq
593 aa
AA seq
DB search
MAATAMASSTDIRYGPEDPTLSKPWKGLIDGKTGYLYYWNPETNITQYERPIISLKASSA
APDKSLSSSVQKSSQGGHKANDDDDRYNRGSNSGSVKVASGTGSYQSARSRSDHLRDDLI
VKASSGLGLFSSKVAESGLSADSYRRQHDITVTGDNVPQPFTSFEATGFPSEILREVYHA
GFSTPTPIQAQSWPIALQGSDVVAIAKTGSGKTLGYLIPGFTHIKKRHNNPKLGPTVLVL
SPTRELATQIQNETAKFGKSSKISCTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILE
MRRVSLRQVSYLVLDEADRMLDMGFEPQIRKIVKEVPTTRQTLMYTATWPKEVRRIAADL
LVKPVQINIGNVDELAANKAITQYVEVLSPVEKHRRLEQILRSQEPGSKIIIFCSTKKMC
DQLARNLTRQFDAAAIHGDKSQGERDHVLSQFRTGRSPVLVATDVAARGLDIKDIRVVIN
FDFPTGIEDYVHRIGRTGRAGATGVAFTFFCDKDAKHASDLVKVLNGANQCVPVEIRDLA
LCGNGMGKAKRQWGSGPSIRNGGHFGSYDSVYGGRGSNRYGAHRSRSPNRNLV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactgcgatggcctcttctactgacattcgatatgggccagaggaccccacc
ctctcaaaaccatggaaaggcctgattgatggtaagacgggatatctttattactggaat
ccagagaccaacattacccaatatgagaggcccattatctctttgaaagcaagctctgct
gcgccagacaaatctttgagttcctcagttcaaaagtcttctcaaggaggccacaaagct
aatgatgatgatgatagatataacagaggtagcaacagtgggtcagtgaaggttgcttct
gggacaggaagttatcagagtgcaagaagcagatctgatcatttacgtgatgatctgatt
gtgaaagcgagttctggacttggattgttctcttcaaaagttgcagaaagtggtttatct
gctgattcttatcgccgtcaacatgacataactgtaactggagataatgtgccccaacct
ttcacttcatttgaagctactggttttccttcagagattcttagggaggtgtaccatgct
ggattttctactcctacaccaatacaggcacagtcatggccaattgctctacaaggttct
gacgtagtagccattgcgaagacaggctctggtaaaactttgggttacttgattcctggc
tttactcacataaagaaacgacacaataatcccaaattaggtccaacagttctagtcttg
tcaccgacaagggagttggcaactcagatacaaaatgaaactgcgaagtttggaaaatca
tctaagatatcttgcacgtgtttgtatggaggtgcaccaaaaggtcctcagttgagagac
ctagacagaggtgtagatgttgtggttgctactcctggtcgcttgaatgatattctagag
atgagaagagtaagcctccgtcaagtttcatacttggtgttagatgaagcggatcggatg
ttggatatggggtttgaacctcagataagaaagattgtcaaggaggtgcctactaccagg
caaacacttatgtacacagcaacatggccaaaggaggtgcggagaattgctgctgatctt
ctggttaaacctgttcagattaacattggaaatgttgatgagcttgctgcgaacaaggct
attacccagtatgttgaagtcctttcacccgtggagaaacataggcggctggagcagata
ttgagatctcaagaaccaggatcgaagataataatattttgttcaactaagaaaatgtgc
gatcaacttgcacgtaacctaacccgccaatttgatgcggctgctattcatggagacaaa
tctcaaggtgagagggatcatgtgttgagtcagtttcgcacaggaaggtcaccggtgctt
gtagccactgatgttgctgctcgtggcctggacatcaaagatattagggtggtgataaac
ttcgactttcccactggaatagaggattatgttcatagaattggaagaacaggacgagca
ggtgcaactggagtggcttttacatttttctgtgacaaggatgcaaaacatgcatcggat
cttgtcaaagttttgaatggagcaaatcaatgtgtccctgttgaaattcgtgatttggct
ttatgtggcaatggaatgggaaaggcaaaacgccaatggggttcaggccctagcatacgt
aatggaggtcattttggaagctatgattctgtctatggtggacgtggcagcaataggtat
ggtgcacatcgcagtagaagccccaatagaaatttagtttga
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