Olea europaea var. sylvestris (wild olive): 111409779
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Entry
111409779 CDS
T05244
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
KO
K10752
histone-binding protein RBBP4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03082
ATP-dependent chromatin remodeling
oeu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111409779
03083 Polycomb repressive complex
111409779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oeu03036
]
111409779
Chromosome and associated proteins [BR:
oeu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111409779
Histone modification proteins
HAT complexes
HATB complex
111409779
HDAC complexes
Sin3A-HDAC complex
111409779
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111409779
PRC2.2
111409779
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111409779
Heterochromatin formation proteins
Other heterochromatin formation proteins
111409779
Chromatin remodeling factors
NuRD complex
111409779
NuRF complex
111409779
NuRF complex (fruit fly)
111409779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD_LRWD1
ANAPC4_WD40
NBCH_WD40
MIOS_WD40
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
111409779
NCBI-ProteinID:
XP_022895583
LinkDB
All DBs
Position
15:1669480..1674136
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AA seq
418 aa
AA seq
DB search
MGKDEEETRGESEERLVNEEYKIWKKNTPFLYDLAITHALEWPSLTVEWLPDLEKPPGKD
YSVQKLILGTHTSDDEPNHLMLAEVKLPLEDAENDDGSEFGGLGCANGKVQIIQQIYHEG
EVNRARYMPQNPFIIATKTVSAEVYVFYYSKHPSKPPLDGPCNPDLRLRGHISEGYGLSW
SPFKQGHLLSGSDDHQICLWDISATPKNNSLDAMQIFKIHEGVVEDVAWHLRHEYLFGSV
GDDQYLHIWDLRTSSVSKPIQSVVAHQSEVNCLAFNALNEWVLATGSTDKTVKLFDLRKI
SSALHTFDCHKEAVFQVGWHPKNETILASCCLGRRLMVWDLSRIDEKQTPEDSEEGPPEL
LFIHGGHTSKVSDFSWNPCEDWVVASVAEDNVLQIWKMAENIYLDDDDVPGDDLSKGS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagacgaggaagagacgcggggtgaaagcgaggagcggttggtaaacgaagag
tacaagatttggaagaagaacaccccattcctctacgatctggcgattacccacgctctt
gagtggccttcgctcacggtagagtggctgccggacctggagaagcctccgggaaaggat
tactcagttcagaagttgatactggggacccatacatcggacgatgagcctaatcacctt
atgcttgccgaggtcaagctcccccttgaggatgctgaaaatgatgatgggtcggaattt
gggggattaggatgcgccaacggcaaggtgcaaattatacagcagatatatcatgaagga
gaagtcaaccgggctcgttatatgccccaaaacccttttattattgccactaagacagtt
agtgcagaagtgtatgttttttattatagcaaacatccttcgaagcctcctttagatggt
ccatgcaaccctgacttgaggctgaggggccacatttctgaaggttatggtttatcgtgg
agtccgttcaagcaaggccatttgttgagtggttctgatgatcaccaaatatgcttgtgg
gacattagtgcaactccaaagaacaactctctagatgctatgcaaatttttaagatccat
gaaggtgttgtagaagatgttgcatggcatctcaggcatgaatacttgtttggttcggtc
ggggatgaccagtatctgcacatttgggatctccgcacttcatcagtcagcaaacctatt
caatctgtagttgctcatcaaagtgaggtaaactgtttagctttcaatgcattaaacgag
tgggttttagcaacaggttctactgacaagactgttaaattatttgatcttcgaaagatt
tcttctgctctccatacgtttgactgtcacaaagaggcagttttccaggttggatggcat
ccaaagaatgagactatcttagcttcttgttgtcttggtaggaggctcatggtgtgggat
cttagcaggattgatgaaaaacaaacaccagaggattctgaagaagggccaccagagttg
ctttttattcacggtggtcatacgagcaaagtttcagatttctcgtggaacccatgtgaa
gattgggttgttgctagtgtagctgaggataacgtattacaaatatggaagatggcagag
aacatctacctcgatgatgatgatgtacctggagatgacttaagtaaaggttcgtag
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