Olea europaea var. sylvestris (wild olive): 111409792
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Entry
111409792 CDS
T05244
Name
(RefSeq) phytochrome A1-like
KO
K12120
phytochrome A
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
111409792
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GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_4
HisKA
PAS_9
PAS_8
Motif
Other DBs
NCBI-GeneID:
111409792
NCBI-ProteinID:
XP_022895596
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Position
15:complement(1896894..1902595)
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AA seq
1122 aa
AA seq
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MSSSLPAQSSTGSARSRHSARVIEQTSIDAKIHADFEESGSLFDYSNSVRVTSVDSGEQR
QRSDKVTTAYLHQIQKGKLIQPFGCLLALDEKTFRVIAYSENAADMLTMVSHAVPSVGDH
PTLGIGTDIKTIFTAPSATALQKALGFGEVSLLNPILVHCKTSGKPFYAIIHRVTGSLII
DFEPVKPYEVPMTAAGALQSYKLAAKAITCLQSLPSGSMETLCDTMVNEVFELTGYDRVM
AYKFHDDDHGEVICEMTKPGLDPYLGLHYPATDIPQAARFLFMKNKVRMICDCRAKHVQV
LQDENLPFDLTLCGSTLRAPHGCHLQYMENMNSIASLVMAVVVNEGEEEESNSAPGQKRK
RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKVLELDNQILEKKILRTQTLLCDM
LMRNAPLGIVSQSPNIMDLVKCDGAGLLYKNEIYKLGLTPTDFQLRDILSWLNEYHMDST
GLSTDSLFDAGFPGALALGDAICGMAAVKITEKDWLFWFRSHAAAEIRWGGAKHDPGEKD
DGRKMHPRSSFKAFLEVVKTRSLPWNDYEMDAIHSLQLILRKAIKETEATDSRTQIIHAG
LNDLRIDGMQELDAVTTEMVRLIETATVPILAVDVDGQVNGWNTKIAELTGLPVEEAIGR
HFLTLVEDSSADTVGRMLELALQGKEERNVQFEIKTQRSMGDSSPISLVVNACVSRDVRQ
NVVGICFIAQDITAQKIIMDKFTRIEGDYRAILQNPNPLIPPIFGTDEFGWCSEWNSAMT
KLTGWRRESVINKMLLGEVFGTHNACCGLKNQEVYVNLGIALNNAVTGQESEKIPFGFFA
RSGKYVECLLCVSRKLDGEGALTGVFCFLQLASPELQQALHIQHLSEQTAQKRLKILAYI
RREIRNPLSGIIFSRKMMEETDLAGEQKILLRTSAQCQHQLNKILDDTDLDSIIDGYLDL
DMMEFELQDVLAASISQVMMKSNGKGITVVDNLAQNLLSETLYGDSLRLQQVLADFLLVS
VNFTPSGGQLGVVASLTKDSLGQSVQLGHLEFRITHTGGGVPEALLSQMFGTGAEASEEG
ISLLISRKLVRLMNGDVQYLREAGRSTFIISVELAVVEKNRA
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgctgcctgcccagtcctctaccggttcagcaagatctagacatagtgcc
cgggtcattgaacaaacgtccatagacgcgaagatccatgcagactttgaggagtcaggt
agtttgtttgactactcgaactcagtgcgtgtaacaagtgtggatagcggagagcagaga
cagaggtctgacaaagtaactacggcttatctccatcaaatacagaaaggcaagctgatc
cagccgtttgggtgtttgttagccctggatgagaaaacattccgagtaatagcttacagc
gagaatgctgccgatatgctgacaatggtcagtcatgccgttcccagtgttggagaccac
cctactcttggcattggaactgatatcaaaactatttttactgccccgagtgctacagca
ttgcagaaggccttgggatttggtgaggtttctctactaaatcctatcttggttcactgc
aaaacttctgggaaaccgttttatgctataatccacagagtcacaggcagtttaatcatt
gacttcgagcccgtcaagccttacgaagtccccatgactgctgctggggccttacaatct
tataagctcgcggccaaagctattacatgcttgcagtccctacccagtgggagcatggaa
acactttgtgatacaatggtgaacgaggtttttgaactcaccggttatgatcgggtgatg
gcttataaatttcacgacgacgatcatggagaggtaatatgtgagatgacaaagcccgga
cttgacccttatctgggtttgcattatccagcaacagatataccgcaggctgcccgcttt
ttgttcatgaagaacaaggtcaggatgatatgtgactgccgagcaaaacatgttcaggtg
cttcaagatgaaaatcttccttttgatcttacactgtgtggctcgacgctgagggctcca
cacggttgccatttacaatacatggaaaatatgaattcaattgcatctttggtaatggca
gttgtagtgaacgagggggaagaagaggaatctaattctgctcctggacaaaagagaaaa
aggctttgggggttagtggtatgtcataacacaactccaaggtttgttccctttcctctc
cgatacgcgtgtgagtttcttgctcaagtttttgccatccatgttaacaaggttttagaa
ctggacaatcagattcttgagaagaaaattctgcggactcaaacactcttgtgtgatatg
ctgatgcgaaatgcacccttaggcatcgtgtcgcaaagccccaacataatggatcttgtg
aaatgtgatggggctggtttactatacaagaatgagatatataagttgggattaactccg
actgactttcagctgcgtgatatactttcatggcttaatgaataccatatggattccaca
ggtcttagtacagacagtttatttgacgctggctttcctggggctcttgctctcggggat
gctatatgtgggatggcggctgttaaaataaccgaaaaggattggcttttctggttcagg
tcgcatgctgctgccgaaattcgttggggcggagctaaacatgatccgggtgagaaagat
gatggtcggaagatgcaccctaggtcatctttcaaagcattcttggaagttgttaaaaca
cggagtttaccttggaatgattatgagatggatgcaatccattctttgcagcttatactg
agaaaggcaatcaaggagaccgaggctacggactcaagaacccaaataatccatgcaggg
ctcaatgatctcagaattgatggaatgcaggaactagatgcagtgacaactgagatggtc
cgattgattgaaacggccaccgtgccaatcttggccgttgatgtagatggacaggtgaat
gggtggaacacaaaaattgccgagctaactggtcttcctgtcgaagaagcaattggcagg
cattttctaacacttgtggaggattcttctgctgatacagtgggcaggatgttggaattg
gcactgcaggggaaagaagaacgcaatgtacaatttgagattaaaactcagcggtcaatg
ggtgattctagccctatcagcttagtcgtaaatgcttgtgtaagtagggatgttaggcaa
aatgttgtaggaatatgttttatagcgcaggatataacagcccagaagattatcatggac
aagttcactagaattgaaggagattacagagctattctacaaaatcctaacccattgatc
ccgcccatatttggcactgacgagtttggttggtgttctgagtggaactcagccatgaca
aagttaactggatggcgaagagagagcgtgatcaataaaatgcttcttggagaagttttc
ggtacacataatgcctgctgcggtctcaagaatcaagaggtgtacgtgaatcttggtatt
gcactcaacaatgcagtgacaggtcaagaatccgaaaaaataccatttggtttttttgct
aggagtgggaagtacgtggaatgcctgctatgtgtgagcagaaagttagatggagagggt
gcactaactggcgttttctgcttcctgcaactggcaagtccagaattgcaacaagcactt
cacattcaacacttatccgagcaaactgcacagaagagattaaaaatcttagcttatatt
agaagggaaattagaaatcctctttcggggattatattttcacggaagatgatggaagaa
actgatctggcaggtgagcagaaaattctactccgtactagtgctcagtgccaacatcaa
ctgaacaagattcttgatgatacagatcttgacagtatcattgacgggtatttggatctg
gacatgatggaatttgagctgcaggatgtattggctgcttccattagtcaagtcatgatg
aagagcaatggaaagggcattacggtagttgataatttggctcaaaacctcttaagcgaa
acgctgtatggagacagtctgaggttacagcaagtcctagcagatttcttgttagtttcg
gtcaatttcacacctagcggaggccagcttggtgttgtggcctctttgactaaagatagt
ttaggacaatcagttcagctcggtcatttggaattcaggataacacacaccggtggtgga
gtaccggaagcattgttgagccaaatgtttggtactggggcagaagcatccgaggagggc
ataagcctactgatcagcagaaaactggtgaggctcatgaatggggatgttcagtacctg
agagaggccgggagatcgaccttcatcatatcagttgaacttgcagttgtggaaaaaaac
cgtgcgtga
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