Olea europaea var. sylvestris (wild olive): 111410307
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Entry
111410307 CDS
T05244
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111410307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111410307
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
111410307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Helicase_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
111410307
NCBI-ProteinID:
XP_022896342
LinkDB
All DBs
Position
15:complement(16834409..16840831)
Genome browser
AA seq
1537 aa
AA seq
DB search
MILFSSAHQFGEMHAGSPSSSSVAKRTRRQWEIFYRNWHNEVKKKLAGESSGNGVRDKGV
IIGENTGGVGNNEGSYSVDPENDEISRENHVRRTGEGSGLEIIGKKAYEIGSVRGDTIGK
KKLNGVKNEDVDDQPVVGGVKRMDEKVPSTGSCSKSGLIPNDGSVACKNCGFHNVCTVVA
DTVVTVNDGKNSGARRRGRPRNEPLNKGNEVPLQTSVDLGKSAEMVDSGGSEESMDSDGS
HDDYSDEDYEASSEEDEDDSDEVYEADLWSSSGESDMSKHCNEETDDDTYSDNSMGGPIK
TKVRPEEKEQPFVDHSLISGSSDSSSSNFNQQTEKDTFFGNDVSSAGEEEKEQSLSLSSG
SSDSLISDVNYVGSAGQEEKEQTLVEHLLSCKSDSLMSGDSDSLSSDVNYMGSANREEKE
QSLVDHSLSSSDSDSLRSDSESLSFDVNYVGSASQEEKEQPVGHHSLSSGDSDVAKYFDN
YRGSSITTKVDQQEQQQRVVDPLSSGDFDFSKHCSGVNEEKDDDAYITIHGACPIKMKVD
PEEKEQTGVSAGKNMLTNEERDSELPGLKRKYEPYSKDGSQEDGDGTDTVKLSKQDSELA
GSKRKCELYPNYGYVDDSQEDGDGNAVKFSKQDHELPGTERGYKPYSNDGHLDDSKKDGD
GTDTVKLTKEEKRLELENFSWRVPISKGEKSNSSLDVEYKSSAKKDSRNAKCVQRTGQKG
TRKVGTFGKEKTGAPRNLDSIKATFDSIEKEVDESTPGKKKTGAERNHLNVSVDSIDKEA
SEPTPSEKRTNEAIKMLVDLIEKEADGPKEYFAPLNNNPNSLPLKFRFEDEEPSPPEKSE
WEKELESLFCDLNMGLREIEPGCINPSTVCDNNDDESIPQVNNSTPAGLCRRGEHDPVFD
EQMGIKCKYCAVVLLEIEDILPPFYTPPSGRTDRKDFGDSHNRIFDQIQFQDTDCGNPSS
SSIHETGTDWNLILNTVDGMYPHQLEGFKFMWKNIARDGNGCIISHAPGTGKTRLTIVFL
QAFMNKNRKCRPVIIAPRGMLLTWEDEFRKWGVNVPFHNLNKLELSEEENAFSEKLIGQV
GSHWRIRDRIRFVKVISWLKSNSILGVSYPLFEKLAGEHQRKEQYDQIRELLLKKPGLLV
LDEGHTPRSDQSLTWKALANVATNRRIMLSGTPFQNNFEELYNTLCLVNPLFADQIDEIH
PSCKRGRKMIHRTRGKRGTLTKFLSETTNDQLMKLRTMIDPFVHVHKGTILQESLPGLRD
SLVFLRPTELQNSLLQIASNGKPFLHEVCLVSLISVHPSLVADQEMFSAYKSEIERIEST
IDAGVKTKFVTKLIWLADALGERVLVFSHFIDPLVFIKQQLQSQFSWNEGREVLYMDGKL
EQNQRQYSINSFNDESSEAKVLLASQKACSEGINLVGASRVVLLDTAWNPSVERQAISRA
YRLGQKKVVHVYRLITSGTVEVQKYAFQAHKDRISQLIFSPTDGPTCHSETSNIVSEDKV
FEALVDDKSINHIFEKIIHQPKASDLIDTFDFTDLKL
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgttctccagtgcccatcaatttggagagatgcacgctggtagtccatcttcg
agttctgtagccaagcgaaccagacgacagtgggaaatattttatagaaattggcacaat
gaggtgaagaagaaactggccggagaaagttctggtaatggcgttagagataagggtgtg
atcattggtgagaatacaggtggtgtgggtaataacgaaggttcatactcggtggatcct
gaaaatgatgaaatttctagggaaaatcatgtgagaaggacaggagaaggttctggtttg
gagattattgggaaaaaagcttatgaaattggttcagtgaggggtgatacaataggaaag
aaaaaattgaatggagttaagaatgaggacgttgatgatcaacctgttgttggtggagtt
aaacgcatggatgaaaaggttccctcaactggctcctgttcgaaatccggattgattcca
aatgatgggagtgttgcttgcaagaactgcgggtttcataatgtttgtaccgtagttgca
gatactgtagttactgtcaatgatgggaaaaacagtggagcacgacgtagaggaagacca
cgaaatgaacctttgaacaagggaaatgaagtgcctttgcagacttcagtcgatttaggg
aagtccgctgagatggttgattcaggaggctcggaggagtcaatggattcagatggatca
catgatgattattcggatgaggactatgaagccagcagtgaagaggatgaagatgattct
gatgaggtctatgaagccgatctttggtcgagctctggtgaatccgatatgtcaaaacac
tgcaatgaagaaacagatgacgatacgtattctgataactctatgggcggtccaattaaa
acgaaggtccgtccagaagaaaaggagcaaccatttgtcgatcattcattgatctctggc
agttcagattcatcgagctccaattttaaccaacaaacagagaaagatacattttttggt
aatgatgtgagcagtgccggagaggaagaaaaggagcaatcactatctttgagctctggc
agttcagattcattgatctctgatgtgaattatgtgggcagtgcgggtcaagaagaaaag
gaacaaacacttgttgaacatttattgagctgtaagtcagattctttgatgtctggcgat
tcagattcattgagctctgatgttaattatatgggcagtgccaatcgagaagaaaaggag
caatcgcttgtcgatcattctttgagctctagcgattcagattcattgaggtcggattcg
gaatcattgagcttcgatgttaattatgtgggcagtgccagtcaggaagaaaaggagcaa
cctgttggccaccattcattgagctctggtgattctgatgttgcaaaatattttgataat
tatcggggcagttcaatcacaacgaaggttgatcaacaagaacagcaacaaagagttgtt
gatccattgagctctggcgatttcgatttttcaaaacattgcagtggggtcaatgaagaa
aaagatgatgatgcatatattactatccatggggcctgtccaattaaaatgaaggttgac
ccggaggaaaaggagcagacaggcgtttccgctggaaagaatatgctaactaatgaggag
agagacagtgaattgccaggtttgaaaagaaaatatgaaccatattcaaaggatggttct
caggaagatggagatggcactgatactgtgaaattgagcaagcaagacagtgaattggca
ggttcgaaaagaaaatgtgaactatatccaaattatggttatgtggatgattctcaggaa
gatggagatggcaatgctgtgaaatttagcaagcaagaccatgaattgccaggtacggaa
agaggatataaaccatattcaaatgatggccatttggatgattctaagaaagatggagat
ggcactgatactgtgaaattgaccaaggaagagaaaagacttgaacttgaaaattttagt
tggcgagttcccatctccaagggtgagaaatccaactcttcactggatgtggagtataaa
tcatcagcaaagaaggatagccgcaatgctaaatgtgtgcaaagaacaggtcagaaaggt
acaaggaaggtggggacatttggcaaggaaaagacaggcgcgccaagaaatcttgactcg
attaaggcaacgtttgattccatagagaaggaagttgatgaatccacacccggtaagaag
aagactggcgcagaaagaaatcatttgaacgtgtcagttgattccatagataaggaagca
agtgaacccacacctagtgagaaaaggactaatgaagcaataaagatgttggtagatttg
atagagaaggaagcagatggacccaaggaatatttcgctcctcttaataacaatccaaat
tccttgccattgaaattcaggtttgaggatgaggagccatctccaccagagaaatcagaa
tgggagaaagaacttgaatctcttttctgtgatttgaatatgggcctcagggaaattgag
cctggctgcataaatccttccacggtttgtgacaacaatgacgacgaatccatcccccaa
gttaataacagcactccagcagggctgtgtcgtcgaggggagcatgatcctgttttcgat
gaacagatgggaattaaatgcaaatattgtgctgtagtgcttctggaaattgaagatatc
ctaccaccattttatacgccaccttccgggaggacggacaggaaagactttggtgactcc
cataaccgtatctttgatcagattcagtttcaggacactgattgtggaaatcccagttcc
tcgtccattcatgaaaccggcacggattggaatttgattcttaacactgtagatggaatg
tatcctcatcaactggaagggtttaaatttatgtggaaaaacatagctagagatggtaac
ggatgcattatttcacatgcccctggtacaggcaaaacccgactgactatagtgtttctc
caagcattcatgaacaagaatcggaaatgccggccagtaataatagctccccgcggcatg
ctcctcacatgggaagatgaattccgaaaatggggtgttaacgtaccttttcacaatttg
aacaaactagagttatctgaggaggaaaatgctttttctgagaaattaattggtcaagta
ggttctcactggaggatccgggatcgcattcgttttgttaaggtgatatcttggttgaag
agtaacagtatcctaggagtcagctacccactgtttgagaagcttgctggagagcatcag
cgaaaagaacaatatgatcaaatcagggaattactgcttaagaagcccggacttttagtt
cttgatgaagggcacacccctcgcagtgaccaaagtcttacgtggaaggctttggcaaat
gttgcaacaaaccggcgcataatgttatctggtactcctttccagaacaatttcgaggag
ctttacaatacactctgcctagttaatccactgtttgctgatcagatcgatgaaattcat
ccaagttgcaaaaggggtaggaaaatgatacatagaactcgtggaaaacggggaactttg
accaagttccttagtgaaactacaaatgatcaattgatgaagcttagaaccatgattgat
ccattcgtccatgtacataaaggaactattcttcaagaaagtctccctggactgagggat
tctctggttttcttgcggccaactgaattgcaaaattccctgttgcaaattgcttcaaat
ggaaagccatttcttcatgaggtttgtttggtgtccttgatctctgtccacccttcattg
gtggctgaccaagaaatgttctctgcttataagagtgaaatagaaaggattgaatcaaca
attgatgctggagtaaaaacaaagtttgtcactaaactaatatggctagctgatgcactt
ggtgagagggttttggtcttcagtcacttcatcgatcctttagtctttatcaagcagcaa
cttcagtctcagttttcttggaatgaagggagggaagtactttatatggatgggaagctt
gaacagaatcaacgtcaatattctatcaactctttcaacgatgaatctagtgaagctaag
gtgcttcttgcatcacaaaaggcttgttctgaaggtataaacttggttggggcttcaaga
gttgtattgttggatactgcctggaacccttcagttgaaaggcaagccataagccgggct
tataggcttggtcagaaaaaggttgtgcatgtatatcgactcatcacatctggaactgta
gaggtccaaaagtatgcattccaagctcataaagatcgcatatcgcaactgatattttct
cctacagatggacccacttgccatagtgagacatcaaacattgtatctgaggataaagtc
tttgaagcattggttgatgataaaagtataaaccacatttttgaaaagataattcatcaa
cccaaagcatctgatctgattgatacttttgattttacggatcttaagctgtaa
DBGET
integrated database retrieval system
